DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31668 and slc5a6b

DIOPT Version :9

Sequence 1:NP_001097055.2 Gene:CG31668 / 33395 FlyBaseID:FBgn0051668 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_005158632.1 Gene:slc5a6b / 796312 ZFINID:ZDB-GENE-050913-86 Length:603 Species:Danio rerio


Alignment Length:608 Identity:198/608 - (32%)
Similarity:323/608 - (53%) Gaps:60/608 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FGTVDYAVFLGVTILSIAIGLYFGFIRKSRNGPKTTTPTNEAPERRHQNFGSKKMNDYMMGSRNL 70
            |..:||.:|..:.:.|::||||:.|    ..|.::||                  .::::..|::
Zfish     9 FTVIDYVIFGLLLVASMSIGLYYAF----TGGRQSTT------------------QEFLIADRSM 51

  Fly    71 RVFPVGMSLIASCISAVAIIGTPSEIYNYGTQYCFIVIALVLQGLAVSYIYLPVFSALQVTSSYE 135
            :..|:.:||:|:..|||||||||:|:|.:||||.||..:.||..|..::|::|:|..|.:||.|:
Zfish    52 KCLPLSLSLMATFQSAVAIIGTPAEVYAHGTQYWFIGCSYVLGLLIPAHIFIPLFYRLHLTSVYQ 116

  Fly   136 YLEMRFHSAIRSIVSIIFILDVVLYLPFLAYLPALALNQVSGMNMYLIEAFIIVICVIYTVLGGL 200
            |||:||..|:|...::.||..:|:|:....|.||||||.|:|.:::.......::|.:||.||||
Zfish   117 YLELRFCKAVRICGTVTFIFQMVIYMGVGIYTPALALNAVTGFHLWGAVLATGLVCTLYTALGGL 181

  Fly   201 KAVVHTDIWQVVIMFASVLTIVVLATCYIDDQADFLE---GLVR-GGRLIFSETNPSPFARHTVW 261
            ||||.||::|.|:||...|.::::..    .||..|.   |.|| |||:...:.||.|..|||.|
Zfish   182 KAVVWTDVFQTVVMFTGQLAVIIVGV----HQAGGLSEAWGKVRDGGRISGIDLNPDPTVRHTFW 242

  Fly   262 SVVIGNTFYWTSLNAVHQTVVHRYMSLPTLKMARASIAFLVVGAAFFISLLCYLGLLIFHAYRDC 326
            ::.:|..|...||..|:|..|.||:|..|.:.|..|...:.......:.|.|.:||::|..|...
Zfish   243 TLAVGGVFLMLSLYGVNQAQVQRYLSSRTEREAVMSCYMVFPCLQLALLLSCLMGLVMFACYGQN 307

  Fly   327 DPLSAGLIMNDDQLVPLFVVNSLGHVYGMPGLFIAGIFGASLSSLSVYLNSTSLVILQDLVRGCF 391
            .|:....|.:.||:|..||::.|.:..|:||||:|.:|.||||::|...||.:.|.:.||::..:
Zfish   308 SPVEQQYITSKDQMVLYFVMDMLQNFPGLPGLFVACLFSASLSTISSAFNSLATVTMVDLIKPHY 372

  Fly   392 KMELGEWASTIVVKGSIVVLGLLAFAMVFVLEKV-SGVLSISVSLAAIAASSTFGIFTVGMLVPW 455
            .|.  |..:|::.|...:..|::..||.:::..: |.||..::|:..:......|:|.:|:..|.
Zfish   373 SMT--EARATLLSKLLALSYGIICLAMAYLVHLMNSSVLQAALSIFGMIGGPLLGLFCLGIFFPC 435

  Fly   456 ANTVGTAVGGIASVLLTGWISFGSQFAAASGQLGSQRLPVSVEGCLANASVAENAWVAEEE---- 516
            ||::|...|..|.:|:..|:..|....    ::.|..:|: :...:....|:||...|..|    
Zfish   436 ANSIGAVTGLSAGLLMAFWVGIGGFLT----RMPSPVIPL-LNSTITVPDVSENITAATAELEAD 495

  Fly   517 -----VFPLYRLSYHWISPIGVLTVVVVGSLVSLVTKPTDIKSLDSDLITPVI---HRFL-PKEC 572
                 :...|.|||.|.|.:...||::||.::|.:|.||....:.|..:.||:   ..:| |..|
Zfish   496 SRSAGLHGFYSLSYMWYSALSSCTVLIVGLIISCITGPTKGDDVASGTVYPVVKTAQSYLKPSTC 560

  Fly   573 FE--------QGNAEEN-SVKDN 586
            .:        .|..|.| :||::
Zfish   561 CKTTAEHKQVDGQKEMNGTVKED 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31668NP_001097055.2 SLC5sbd_NIS-SMVT 9..531 CDD:271383 178/535 (33%)
slc5a6bXP_005158632.1 SLC5-6-like_sbd 9..532 CDD:294310 184/555 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489472at33208
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.