DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31668 and Slc5a10

DIOPT Version :9

Sequence 1:NP_001097055.2 Gene:CG31668 / 33395 FlyBaseID:FBgn0051668 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001100477.1 Gene:Slc5a10 / 303205 RGDID:1305232 Length:596 Species:Rattus norvegicus


Alignment Length:616 Identity:139/616 - (22%)
Similarity:243/616 - (39%) Gaps:149/616 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RFGTVDYAVFLGVTILSIAIGLYFGFIRKSRNGPKTTTPTNEAPERRHQNFGSKKMNDYMMGSRN 69
            :..|.|..|......|::|:|::.. .|.::|                      .::.|.:..|:
  Rat    15 QLSTSDIIVISLYFALNVAVGVWTA-CRANKN----------------------TVSGYFLAGRD 56

  Fly    70 LRVFPVGMSLIASCISAVAIIGTPSE-------IYNYGTQYCFIVIALVLQGLAVSYIYLPVFSA 127
            :..:|:|.||.||...:...||....       :..:.....::::||       :::::|::.:
  Rat    57 MAWWPIGASLFASSEGSGLFIGLAGSGAAGGLAVAGFEWNATYVLLAL-------AWVFVPIYVS 114

  Fly   128 LQVTSSYEYLEMRF-HSAIRSIVSII-FILDVVLYLPFLAYLPALALNQVSGMNMYLIEAFIIVI 190
            .::.:..||::.|| ...||..:|:: .:|.|...:....|..||.::...|.|.||.....:.|
  Rat   115 SEIVTLPEYIQKRFGGQRIRMYLSVLSLLLSVFTKISIDLYAGALFVHICLGWNFYLSTILTLAI 179

  Fly   191 CVIYTVLGGLKAVVHTDIWQVVIMFASVLTIVVLA--------------------------TCYI 229
            ..:||:.|||..|::||..|..||....:.:.|.|                          ||::
  Rat   180 TALYTIAGGLATVIYTDALQTAIMVVGAVILAVKAFNQIGGYEQLEAAYAQATPSRTIPNTTCHL 244

  Fly   230 DDQADFLEGLVRGGRLIFSE--TNPSPFARHTVWSVVIGNTFYWTSLNAVHQTVVHRYMSLPTLK 292
             .:||.:.        :|.:  |...|:...| :.:.|..|:||    ...|.:|.|.:|...|.
  Rat   245 -PRADAMH--------MFRDPSTGDLPWTGMT-FGLTIMATWYW----CTDQVIVQRSLSARNLN 295

  Fly   293 MARASIAFLVVGAAFFISLLCYLGLLIFHAY--RDCDPLSAGLIMNDD----------------- 338
            .|:|....     |.::.:| .:||:|....  |...|...|.::..:                 
  Rat   296 HAKAGSIL-----ASYLKML-PMGLMIMPGMISRVLFPDDVGCVVPSECLRACGAEIGCSNIAYP 354

  Fly   339 ----QLVPLFVVNSLGHVYGMPGLFIAGIFGASLSSLSVYLNSTSLVILQDLVRGCFKMELGEWA 399
                :|:|:          |:.||.||.:..|.||||:...||:|.:...|:.|. |:...||..
  Rat   355 KLVMELMPI----------GLRGLMIAVMMAALLSSLTSIFNSSSTLFTMDIWRQ-FRPGAGERE 408

  Fly   400 STIVVKGSIVVLGLLAFAMVFVLE-KVSGVLSISV-SLAAIAASSTFGIFTVGMLVPWANTVGTA 462
            ..:|.:..||||..::.|.:.||: ..||.|.|.: |:.:..|.....||.:|:....||..| |
  Rat   409 LLLVGRLVIVVLVGVSVAWIPVLQGSNSGQLFIYMQSVTSSLAPPVTAIFLLGIFWRRANEQG-A 472

  Fly   463 VGGIASVLLTGWISFGSQFAAASGQLGSQRLPVSVEGCLANASVAENAWVAEEEVFPLYRLSY-H 526
            ..|:.:.||.|.:....:|.......|.                      .:...|||..:.| |
  Rat   473 FWGLMAGLLVGALRLVLEFLYPEPHCGQ----------------------IDTRPFPLGSIHYLH 515

  Fly   527 WISPIGVLT--VVVVGSLVSLVTKPTDIKSL 555
            :...:..||  |:..|||:|...:...|::|
  Rat   516 FAIALFFLTCAVMAAGSLLSPPPQQRQIENL 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31668NP_001097055.2 SLC5sbd_NIS-SMVT 9..531 CDD:271383 129/584 (22%)
Slc5a10NP_001100477.1 SLC5-6-like_sbd 17..596 CDD:294310 139/614 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340232
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

Return to query results.
Submit another query.