DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10874 and ccdc28b

DIOPT Version :9

Sequence 1:NP_001259911.1 Gene:CG10874 / 33394 FlyBaseID:FBgn0031395 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001016093.1 Gene:ccdc28b / 548847 XenbaseID:XB-GENE-957340 Length:189 Species:Xenopus tropicalis


Alignment Length:141 Identity:57/141 - (40%)
Similarity:79/141 - (56%) Gaps:18/141 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 HSNSNQNTPRLQR----RKNPTASMPNASAHSDKFDDRPIKHHSFVSEVPDVKHMERALLGLLDD 234
            |..|.:...:::|    |..||||....|       ..|...|||:::|..|..||..||.||:|
 Frog    42 HPPSPKQRGKVKRGVKERTRPTASCEAGS-------PGPSLQHSFLTDVSHVCEMEGGLLSLLND 99

  Fly   235 FHSGKLRAFAGSGCTMDQMTKIREQQESLAKLHFELAAAEEDSLEHGNEFNTNKAQENMLQLMQR 299
            ||||||:|| |..|:.:|:.::||.||.||:|||.|....||..|.      ..|::|:.||:..
 Frog   100 FHSGKLQAF-GQVCSFEQLERVREMQEQLARLHFSLDVCAEDLREE------THAEQNLEQLLSN 157

  Fly   300 LEQLSISIEQL 310
            ||:||.||::|
 Frog   158 LEELSNSIQKL 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10874NP_001259911.1 DUF4061 219..307 CDD:290010 40/87 (46%)
ccdc28bNP_001016093.1 DUF4061 86..166 CDD:315851 41/86 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 75 1.000 Domainoid score I8898
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I5061
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1460268at2759
OrthoFinder 1 1.000 - - FOG0003935
OrthoInspector 1 1.000 - - otm48663
Panther 1 1.100 - - O PTHR13400
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2708
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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