DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10874 and ccdc28a

DIOPT Version :10

Sequence 1:NP_001259911.1 Gene:CG10874 / 33394 FlyBaseID:FBgn0031395 Length:317 Species:Drosophila melanogaster
Sequence 2:XP_005158777.1 Gene:ccdc28a / 326808 ZFINID:ZDB-GENE-030131-5007 Length:209 Species:Danio rerio


Alignment Length:195 Identity:66/195 - (33%)
Similarity:102/195 - (52%) Gaps:35/195 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 PTATDNHNTPKNNNNDSTKPNNNNQHS---NSNQNTPRLQRRKNPTASM---------------- 194
            |...:..:...:|.||:.:..:..:.|   :|||..|.:..||..:.|.                
Zfish    13 PPTPEGQSPVPDNLNDTMEEKSKKRKSPKPSSNQLPPSVPARKTTSRSFGVGGIGTHSSQRAKNR 77

  Fly   195 ------PNASAHSDKFDDRPIKHHSFVSEVPDVKHMERALLGLLDDFHSGKLRAFAGSGCTMDQM 253
                  |...:.|.|.:......|||:::|.||:.||:.||.||:|||||||:|| |:.|::|||
Zfish    78 RGARDKPRPQSQSGKSNQSSHIQHSFLTDVSDVQEMEKGLLSLLNDFHSGKLQAF-GNECSIDQM 141

  Fly   254 TKIREQQESLAKLHFELAAAEEDSL---EHGNEFNTNKAQENMLQLMQRLEQLSISIEQLQTSHT 315
            ..:||.||:||:|||:| ..|.|.|   :..:.::|     ||.:|:..||:||.||::|..:.|
Zfish   142 EHVREMQETLARLHFDL-YGEVDELPEDQRKSAYDT-----NMDKLLLNLEELSSSIQKLNLADT 200

  Fly   316  315
            Zfish   201  200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10874NP_001259911.1 CCDC28 219..308 CDD:463822 44/91 (48%)
ccdc28aXP_005158777.1 CCDC28 108..180 CDD:463822 38/78 (49%)

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