DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNAI3 and CG12605

DIOPT Version :10

Sequence 1:NP_840101.1 Gene:SNAI3 / 333929 HGNCID:18411 Length:292 Species:Homo sapiens
Sequence 2:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster


Alignment Length:284 Identity:104/284 - (36%)
Similarity:140/284 - (49%) Gaps:36/284 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    26 EINGACSACGGLVVPLLPRDKEAPS-VPGDLP-------QPWDRSSAVACISLPLLPRIEEALGA 82
            ::.|..|.......||.|.:.:..| |..|:.       |.|.:.:          |:..:...:
  Fly   307 DLMGGSSEGANNCSPLTPPNSDHSSDVDIDMSSSSESGLQQWGKPN----------PQQNQQRAS 361

Human    83 SGLDALEVSEVDPRASRAAIVPLKDSLNHLNLPPLLVL-------------PTRWSPTLGPDRHG 134
            :....|.:.:...:||:||.|..:|....:...|....             |...:.:||....|
  Fly   362 ALKMCLNMLDGRTKASKAAAVTKQDRQEPMQPRPKSAQSNASSGGGPPSEPPENPAASLGHSSSG 426

Human   135 APEKLLGAERMPRAPGGFECFHCHKPYHTLAGLARHRQLHCHLQVGRVFTCKYCDKEYTSLGALK 199
            ..|.....:|     |.::|..|.|.|.|.:.|:||:|.|..|.......|..|.|.|.|:.||.
  Fly   427 NGENYAKRKR-----GCYKCCECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMPALA 486

Human   200 MHIRTHTLPCTCKICGKAFSRPWLLQGHVRTHTGEKPYACSHCSRAFADRSNLRAHLQTHSDAKK 264
            ||:.||.|..:|.||||.||||||||||:|:|||||||||.||.:|||||||||||:||||..|.
  Fly   487 MHLLTHKLSHSCDICGKLFSRPWLLQGHLRSHTGEKPYACVHCGKAFADRSNLRAHMQTHSGDKN 551

Human   265 YRCRRCTKTFSRMSLLARHEESGC 288
            ::|.||.|||:..|.|.:|.||.|
  Fly   552 FKCHRCNKTFALKSYLNKHLESAC 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNAI3NP_840101.1 SNAG domain. /evidence=ECO:0000250 1..20
C2H2 Zn finger 154..174 CDD:275370 9/19 (47%)
zf-C2H2 183..205 CDD:395048 9/21 (43%)
C2H2 Zn finger 185..205 CDD:275368 9/19 (47%)
COG5048 <206..>278 CDD:227381 50/71 (70%)
C2H2 Zn finger 211..231 CDD:275368 16/19 (84%)
C2H2 Zn finger 239..259 CDD:275368 15/19 (79%)
C2H2 Zn finger 267..283 CDD:275368 8/15 (53%)
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 96/268 (36%)
zf-C2H2 439..461 CDD:395048 9/21 (43%)
C2H2 Zn finger 441..461 CDD:275370 9/19 (47%)
C2H2 Zn finger 472..492 CDD:275368 9/19 (47%)
zf-C2H2 496..518 CDD:395048 16/21 (76%)
C2H2 Zn finger 498..518 CDD:275368 16/19 (84%)
zf-H2C2_2 511..534 CDD:463886 17/22 (77%)
zf-C2H2 524..546 CDD:395048 17/21 (81%)
C2H2 Zn finger 526..546 CDD:275368 15/19 (79%)
zf-H2C2_2 538..562 CDD:463886 15/23 (65%)
C2H2 Zn finger 554..571 CDD:275368 8/16 (50%)
Blue background indicates that the domain is not in the aligned region.

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