DRSC/TRiP Functional Genomics Resources

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Protein Alignment aop and elk1

DIOPT Version :9

Sequence 1:NP_001259908.1 Gene:aop / 33392 FlyBaseID:FBgn0000097 Length:732 Species:Drosophila melanogaster
Sequence 2:XP_696294.3 Gene:elk1 / 567895 ZFINID:ZDB-GENE-090529-5 Length:521 Species:Danio rerio


Alignment Length:413 Identity:103/413 - (24%)
Similarity:159/413 - (38%) Gaps:140/413 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   398 LWDFLQQLLNDRNQKYSDLIAWKCRDTGVFKIVDPAGLAKLWGIQKNHLSMNYDKMSRALRYYYR 462
            ||.||..||:|:|||:  ||:|...| |.||::|...:|:|||::||..:|||||:||||||||.
Zfish    16 LWQFLLHLLDDQNQKH--LISWTSGD-GEFKLLDAEEVARLWGLRKNKTNMNYDKLSRALRYYYD 77

  Fly   463 VNILRKVQGERHCYQFLR--NPTELKNIK------------NISLLRQSTPANG----------- 502
            .||::||.|::..|:|:.  :|.....:|            .:.|..|:.|..|           
Zfish    78 KNIIKKVSGQKFVYKFVTYPDPNSADGLKGTEDSQRASTGEKLELSIQTKPMGGATTANQCLSKS 142

  Fly   503 ---NGGSPSMPQGSS------------------QAP------------------GSPA------- 521
               ...|||..|.||                  |.|                  ..||       
Zfish   143 LQVQRSSPSSVQRSSRNDYMKSGLYSTFTIQSLQTPCKGNSKLIKTEHVLNDCNPKPASLDRTMH 207

  Fly   522 --------GQNWNPQQQSQQQQQSPQRPASRNGPMSLPAVAAVAAAAAAAYGPPPTSPLFMHAIN 578
                    ||..:.|.||..:..:.|...::..|.:.||::....:.:|.            ||.
Zfish   208 EMRVCQTEGQQGSVQAQSTVESSNLQVIVTQPSPCATPALSPQTPSGSAT------------AIT 260

  Fly   579 GAFHYLSAAAAGPPPNSPALNTPSAVGG-----PDKFQFHPLKLENGSGSGSESAGEDLKPTDLS 638
            ......|.:...||  ...|:.||::..     |.:...:|          |:.....:||..:.
Zfish   261 NNQAQKSQSLGDPP--QIYLSDPSSLTSLIPLPPGECVVNP----------SQHVFVVIKPPSVG 313

  Fly   639 VSSKSTATSNEDCYPLIRNADGLTTIKLIRYNEHQVAASPAGQSPKHDDQQAGASNASSSPRPMD 703
            .|.:|:.:::||...::...|        :.:...|:|.|.          .|.::|   |.|:|
Zfish   314 QSKESSLSADEDLLEIVSLED--------KADVEPVSAVPV----------PGVTDA---PIPVD 357

  Fly   704 QASEQAQPV--PMESDCNGGESE 724
            ..|...:||  |:      ||.|
Zfish   358 ATSPCVEPVGPPV------GEGE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aopNP_001259908.1 SAM_PNT-Tel_Yan 49..116 CDD:176085
ETS 395..482 CDD:197710 44/85 (52%)
elk1XP_696294.3 ETS 13..98 CDD:197710 44/84 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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