DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aop and elf2a

DIOPT Version :9

Sequence 1:NP_001259908.1 Gene:aop / 33392 FlyBaseID:FBgn0000097 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_001004116.1 Gene:elf2a / 445489 ZFINID:ZDB-GENE-040822-41 Length:514 Species:Danio rerio


Alignment Length:523 Identity:130/523 - (24%)
Similarity:195/523 - (37%) Gaps:149/523 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 TGSNGSQPNIMPMKGISSASSNHSDSEEEYSETSGGVSKMPPAPLSYSTASPPGTPILKDIKPNW 299
            |....:|..:.|            |.||.|.|      |..||.:.....|       .|::..:
Zfish    18 TADEEAQQEVCP------------DGEESYGE------KDCPAVIVEQVNS-------ADVEQCY 57

  Fly   300 TQQL-----TNSF-VNSWSQQQ--QQQQQQQAAAVAAV------AAQAQQH-----QLQQQQQQQ 345
            ..|:     .|:: |...:::|  :.:.|:.||...:|      ||:|..|     .||..:..:
Zfish    58 AAQVLVYDDQNTYLVQDVAEEQVVETELQEMAAVEVSVHDKTIEAAEALLHMDSPASLQGDRSTE 122

  Fly   346 QLPQKLTLD---NTAGPV-----VTPAGGSIS-------APTTP--------SYMYKAKREFFPE 387
            :|..::.::   ...|||     |.....|:.       .|.||        ..:||.|    .:
Zfish   123 ELLSEVEVEVRTEDMGPVAKDIIVLQEADSLKKKKRAGRKPRTPRNCCDGSLDLVYKRK----SK 183

  Fly   388 NSEPNTNGRLLWDFLQQLLNDRN--QKYSDLIAWKCRDTGVFKIVDPAGLAKLWGIQKNHLSMNY 450
            :|:.:|.  .||:||..||.|:.  .||   |.|..::.|:||:||...::||||..||...|||
Zfish   184 DSKGSTT--YLWEFLLDLLQDKETCPKY---IKWTQKEKGIFKLVDSKAVSKLWGRHKNKPDMNY 243

  Fly   451 DKMSRALRYYYRVNILRKVQGERHCYQFLRNPTELKNI------KNISLLRQSTPANGNGGSPSM 509
            :.|.|||||||:..||.||:|:|..|||...|.::..|      .:|...::.|||..|..:|  
Zfish   244 ETMGRALRYYYQRGILSKVEGQRLVYQFKEMPKDIVFIDDDNMDDSIEEGKRETPAASNRSNP-- 306

  Fly   510 PQGSSQAPGSPAGQNWNP--------QQQSQQQQQSPQRPASRNGPMSLPAVAAVAAAAAAAYGP 566
                 :..|||:  |..|        |......|||....::..|.:.|.....|......    
Zfish   307 -----RGKGSPS--NAVPKIINLTSGQDAFMTVQQSGDSISAAPGTVRLAMQVPVLMTTQG---- 360

  Fly   567 PPTSPLFMHAINGAFHYLSAAAAGPPPNSPALNTPSAVGGPDK-----FQFHPLKLENGSGSGSE 626
            ...|.:.|::              |...||.|..|:::.|.:.     .|..|..:.....||..
Zfish   361 QKISTVTMNS--------------PTVRSPILPAPNSISGGNSAGKVLLQAVPTLVPAQGQSGER 411

  Fly   627 ----------SAGEDLKPTDLSVSSKSTA-TSNEDCYPLIRNADGLTTIKLIRYNEHQVAASPAG 680
                      ..|:...|..||..|..|. |||.....|...:..:||              ||.
Zfish   412 ITLQLITLPTMPGKPGTPITLSALSPLTVPTSNTQVLKLAIPSSIITT--------------PAS 462

  Fly   681 QSP 683
            .:|
Zfish   463 TAP 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aopNP_001259908.1 SAM_PNT-Tel_Yan 49..116 CDD:176085
ETS 395..482 CDD:197710 42/88 (48%)
elf2aNP_001004116.1 Elf-1_N 4..112 CDD:289109 25/118 (21%)
Ets 192..271 CDD:278602 40/81 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3804
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.