DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aop and pnt

DIOPT Version :9

Sequence 1:NP_001259908.1 Gene:aop / 33392 FlyBaseID:FBgn0000097 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_524461.2 Gene:pnt / 42757 FlyBaseID:FBgn0003118 Length:718 Species:Drosophila melanogaster


Alignment Length:612 Identity:137/612 - (22%)
Similarity:217/612 - (35%) Gaps:186/612 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LPVQLSLNSLNPGI--------------WSDVLWRCPPAPSSQLAELKTQLPPSLPSDPRLWSRE 57
            |.|..:|..|.||.              |...:.:|                 ::..|||.|:.|
  Fly   141 LEVPTALPPLTPGTNRKVNEVLKASFASWEKEVQKC-----------------NITKDPREWTEE 188

  Fly    58 DVLVFLRFCVREFDLPKLDFD-LFQMNGKALCLLTRADF-GHRCPGAGDVLHNVLQMLIIESHMM 120
            .|:.:|.:...||.|..::.| .::|.|:|:..|.:..| ....|..||:|...|.:|     ..
  Fly   189 HVIYWLNWAKNEFSLVSMNLDPFYKMKGRAMVDLGKEKFLAITPPFTGDILWEHLDIL-----QK 248

  Fly   121 QWHLPNSPVT------------------PTSRYPLSPHSHPPTPTWPPLNA-----------PPE 156
            ....||..:.                  ..:.||...|::....:   :|:           ..:
  Fly   249 DCEKPNEDIVHGNSFESATTASVCGSDHQVANYPNETHANSNNSS---INSRLSMDYVTSAGNSD 310

  Fly   157 NSPFH-SSAHSLAGH-----HFMAPNSVTLSPPPSVDSQASSPPQAPYQNGGATGAAPGSAGGSA 215
            |..|| ::.||..|:     |....||   :||....|      |.|..||..:.::..:.....
  Fly   311 NKNFHRATPHSHNGYNTSNTHDRINNS---TPPQQQQS------QQPTVNGSGSASSNNNNSMLP 366

  Fly   216 PAAGGATNTSNPTSSSASSTGSN-----GSQPNIMPMKGISSASSNHSDS--------------- 260
            ||...:.|.:|.||||.::..||     |...|       |:|.||::::               
  Fly   367 PAVQQSNNENNNTSSSNTNNSSNNNNNSGGSNN-------SNAGSNNNNNNNNNINFMAAAAIFQ 424

  Fly   261 ---EEEYSETSGGV--------SKMPPAPLS----------YSTASPPGTPILKDIKPNWTQQLT 304
               :||....:|.:        |:..|..||          |...|..|....:.......:...
  Fly   425 HHLKEEPGTQNGNIGGYGGGSNSQNDPTDLSSYGLPAHLAAYGGGSGSGPTGGRSSGGGGDESDY 489

  Fly   305 NSFVNSWSQQQQQQQQQQAAAVA--------------------AVAAQAQQHQ--------LQQQ 341
            :|.:::...|.||......:..|                    :.|.:.:.|.        ...|
  Fly   490 HSTISAQDHQSQQSSGGNGSGGASGGSTGNSNGYLDSSSEFYGSYAGRNRFHDGYPPEFTPYDAQ 554

  Fly   342 QQQQQLPQKLTLDNTAGPVVTPAGGSISAPTTP-SYMYKAKRE------FFPENSEPNTNGR--- 396
            ..|...||...:|.         .|:..|...| :||.....:      :..:...|...|.   
  Fly   555 SFQSMGPQPTAMDQ---------WGAAHAHQHPAAYMSTLGLDKGLLGGYTTQGGVPCFTGSGPI 610

  Fly   397 LLWDFLQQLLNDRNQKYSDLIAWKCRDTGVFKIVDPAGLAKLWGIQKNHLSMNYDKMSRALRYYY 461
            .||.||.:||.|:.  ....|:| ..|...||:.||..:|:.|||:||...|||:|:||.|||||
  Fly   611 QLWQFLLELLLDKT--CQSFISW-TGDGWEFKLTDPDEVARRWGIRKNKPKMNYEKLSRGLRYYY 672

  Fly   462 RVNILRKVQGERHCYQFLRNPTELKNI 488
            ..||:.|..|:|:.|:|:   .:|:|:
  Fly   673 DKNIIHKTAGKRYVYRFV---CDLQNL 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aopNP_001259908.1 SAM_PNT-Tel_Yan 49..116 CDD:176085 22/68 (32%)
ETS 395..482 CDD:197710 39/89 (44%)
pntNP_524461.2 SAM_PNT-ETS-1,2 179..250 CDD:188879 22/75 (29%)
ETS 609..693 CDD:197710 38/89 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 87 1.000 Inparanoid score I3709
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11849
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.060

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