DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aop and Elf2

DIOPT Version :9

Sequence 1:NP_001259908.1 Gene:aop / 33392 FlyBaseID:FBgn0000097 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_001029081.1 Gene:Elf2 / 361944 RGDID:1310585 Length:591 Species:Rattus norvegicus


Alignment Length:663 Identity:145/663 - (21%)
Similarity:228/663 - (34%) Gaps:256/663 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 SASSTGSNGSQPNIMPMKGISSASSNHSDSEEEYSETSGG----------VSKMPPAPLSYSTAS 285
            :::..|..||         :...|||..:::|      ||          |..:|.|.|....|:
  Rat     2 ASAVVGGGGS---------VLELSSNGVENQE------GGDTVPEFPAVIVEPVPSARLEQGYAA 51

  Fly   286 -----PPGTPILKDIKPNWTQQLTNSFVNSWSQQQQQQQQQQAAAVAAVAAQAQQH----QLQQQ 341
                 ...|.:::|:                 .::|:.:.:.:..|.|....:..|    .::..
  Rat    52 QVLVYDDETYMMQDV-----------------AEEQEVETENSETVEASVHSSNAHCTDKTIEAA 99

  Fly   342 QQQQQLPQKLTLDNTAGPVVTPAGGSISAPTTPSYMYKAKR---------EFFPENSEP------ 391
            :....:.....|.::..||.......||   ||.:::.|.|         |...|.|||      
  Rat   100 EALLHMESPTCLRDSRSPVEVFVPPCIS---TPEFIHAAMRPDVITETVVEVSTEESEPMDASPI 161

  Fly   392 ------------------------------------------NTNGRLLWDFLQQLLNDRN--QK 412
                                                      ..|...||:||..||.|:|  .:
  Rat   162 PTSPDSHEPMKKKKVGRKPKTQQSPVSNGSPELGVKKKAREGKGNTTYLWEFLLDLLQDKNTCPR 226

  Fly   413 YSDLIAWKCRDTGVFKIVDPAGLAKLWGIQKNHLSMNYDKMSRALRYYYRVNILRKVQGERHCYQ 477
            |   |.|..|:.|:||:||...::||||..||...|||:.|.|||||||:..||.||:|:|..||
  Rat   227 Y---IKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQ 288

  Fly   478 FLRNPTEL---------------------KNIKNI-----SLLRQSTPANGNGGSPSMPQGSSQA 516
            |...|..:                     |:::.:     |||:.:|...|              
  Rat   289 FKDMPKNIVVIDDDKSETCPEDLAAAADDKSLERVSLSAESLLKAATAVRG-------------- 339

  Fly   517 PGSPAGQNWNPQQQSQQQQ--------QSPQRPASRNGPMSLPAVAAVAAAAAAAYGPPPT---- 569
                 |:|.:|...|:.::        .||...||...|.:   .|.|:||||     |.|    
  Rat   340 -----GKNSSPMNCSRAEKGVTRVVNITSPAHDASSRCPTT---TAPVSAAAA-----PRTVRVA 391

  Fly   570 --SPLFMHAINGAFHYLSAAA--AGPP---PNSPALNT-------------PSAVGGPDKFQFHP 614
              .|:.|.::......::..:  ||.|   ..|||..:             |::....|:....|
  Rat   392 MQVPVVMTSLGQKISTVAVQSVNAGTPLITSTSPATASSPKVVIQTVPTVMPASAENGDRITMQP 456

  Fly   615 LKL----------------ENGSGSGSESAGEDLKPTDLSVSSKSTATSNEDCYPLIR------N 657
            .|:                .|.:||||.|    |..|.|:|.: .|..|.....|::|      .
  Rat   457 AKIITIPATQLAQCQLQTKSNLTGSGSIS----LVGTPLAVRA-LTPVSIAHGTPVMRLSVPAQQ 516

  Fly   658 ADGLTTIKLIRYNEHQVAASPAGQS----PKHD-------DQQAGASNAS-------SSPRPMDQ 704
            |.|.|..::|    ..|...|..:|    .:||       :::....|.:       |:|     
  Rat   517 ASGQTPPRVI----SAVIKGPEVKSEAKKQEHDVKTLQLVEEKGADGNKTVTHVVVVSAP----- 572

  Fly   705 ASEQAQPVPMESD 717
             |..|.||.|:::
  Rat   573 -SAIALPVTMKTE 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aopNP_001259908.1 SAM_PNT-Tel_Yan 49..116 CDD:176085
ETS 395..482 CDD:197710 43/88 (49%)
Elf2NP_001029081.1 Elf-1_N 3..108 CDD:403506 20/136 (15%)
Ets 209..289 CDD:395126 41/82 (50%)
Herpes_BLLF1 <349..>528 CDD:282904 44/195 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3804
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.