DRSC/TRiP Functional Genomics Resources

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Protein Alignment aop and elf1

DIOPT Version :9

Sequence 1:NP_001259908.1 Gene:aop / 33392 FlyBaseID:FBgn0000097 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_571234.2 Gene:elf1 / 30396 ZFINID:ZDB-GENE-980526-335 Length:639 Species:Danio rerio


Alignment Length:572 Identity:145/572 - (25%)
Similarity:205/572 - (35%) Gaps:158/572 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 GSAGGS--APAAGGATNTSNPTSSSASSTGSNGSQPNIMPMKGISSASSNHSDSEEEYSETSGGV 271
            |..|.|  .|.:||..|.....::.|.                ::..|.|:...|:....|.|.:
Zfish    75 GDVGLSVETPVSGGEDNMETIEAAEAL----------------LNMESPNNILDEKRMIHTYGNI 123

  Fly   272 SKMPPAPLSYSTASPPGTPILKDIKPNWTQQLTNSFVNSWSQQQQQQQQQQAAAVAAVAAQAQQH 336
            .:   ..|||.:..|              :.|:|..                    .||...:..
Zfish   124 LE---TDLSYISLRP--------------EHLSNGM--------------------DVAHDDETS 151

  Fly   337 QLQQQQQQQQLPQKLTLDNTAGP-----VVTPAGGSISAP-TTPSYMYKAKREFFPENSEPNTNG 395
            .|      .::|||    |.:.|     |..|......:| |.||...|.|      :.|...|.
Zfish   152 SL------DEVPQK----NFSKPARKTKVRKPRPARPCSPITNPSLPLKKK------SKEGKGNT 200

  Fly   396 RLLWDFLQQLLNDRN--QKYSDLIAWKCRDTGVFKIVDPAGLAKLWGIQKNHLSMNYDKMSRALR 458
            ..||:||..||.|:|  .||   |.|..|:.|:||:||...::||||..||...|||:.|.||||
Zfish   201 IYLWEFLLALLQDKNTCPKY---IKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALR 262

  Fly   459 YYYRVNILRKVQGERHCYQFLRNPTELKNIKNISLLRQSTPANGNGGSPSMPQGSSQAPGSPAGQ 523
            |||:..||.||:|:|..|||...||:|..|...........| |.||..:.|.| ....||...|
Zfish   263 YYYQRGILAKVEGQRLVYQFKEMPTDLVIIDEDDGQGDDGGA-GYGGHRAAPHG-RVGRGSSRSQ 325

  Fly   524 NWNPQQQSQQQQQSPQRPASRNGPMS---LPAVAAVAAAAAAAYGPPPTSPLFMHAINGAFHYLS 585
            ..|.|.::.:::.||.. .||||..:   |..|..:.....||.      |...|::.       
Zfish   326 GRNTQVKTVKREMSPGL-NSRNGKQAEQLLQTVHVLQPNQGAAV------PAQTHSVR------- 376

  Fly   586 AAAAGPPPNSPALNTPSAV-GGPDKFQFHPLK--LENGSGS--------------GSESAGEDLK 633
              ....|.:.|.:.|..|. |||...|..||.  |.||..|              .:...|:|: 
Zfish   377 --TINMPGSVPMVLTSGAQGGGPMTLQTLPLSSVLTNGDSSTHASPPRVILHTVPSTSPGGKDV- 438

  Fly   634 PTDLSVSSKSTATSNEDCYPLI-------------------RNADGLTTIKLIRYNEHQVAASPA 679
               |::.:.|..|.:.....|:                   .:.:|:|.:..:..|...|.|   
Zfish   439 ---LTIQTASLTTDSLHSQQLLVSTLSSSSGGVISTTPQQTASLNGITRLVTLNANGQPVVA--- 497

  Fly   680 GQSPKHDDQQAGASNAS----SSPRPMDQASEQAQPVPMESDCNGGESEDSF 727
                    ||.|...|:    |..:.:....|.:.|...:|..|...|..||
Zfish   498 --------QQPGTVIATVLKPSEYQSLQVKEEISDPQYFQSLVNNSPSFASF 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aopNP_001259908.1 SAM_PNT-Tel_Yan 49..116 CDD:176085
ETS 395..482 CDD:197710 44/88 (50%)
elf1NP_571234.2 Elf-1_N 2..107 CDD:289109 8/47 (17%)
Ets 203..282 CDD:278602 42/81 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3804
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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