DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aop and Elf1

DIOPT Version :9

Sequence 1:NP_001259908.1 Gene:aop / 33392 FlyBaseID:FBgn0000097 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_001273340.1 Gene:Elf1 / 13709 MGIID:107180 Length:612 Species:Mus musculus


Alignment Length:587 Identity:137/587 - (23%)
Similarity:204/587 - (34%) Gaps:190/587 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 ASSNHSDSEEEYSETSGGVSKMPPAPLSYSTASPPGTPILKDIKPNWTQQLTNSFVNSWS----- 312
            ||.::.|...|..|.:       .|.|:..:.||   |:|.:      :|:.|:..:|..     
Mouse    87 ASCHNGDETIETIEAA-------EALLNIDSPSP---PVLDE------KQINNNIFSSSEDDIVA 135

  Fly   313 -------------QQQQQQQQQQAAAVAAVAAQAQQHQLQQQQQQQQLPQKLTLDNTAGPVVTPA 364
                         :..:.||.|:..|.:..|:..:|.:.::.::                  |..
Mouse   136 PITHVSVTLDGIPEVMETQQVQETNADSPGASSPEQRKRKKGRK------------------TKP 182

  Fly   365 GGSISAPTTPSYMYKAKREFFPENSEPNTNGRLLWDFLQQLLNDRN--QKYSDLIAWKCRDTGVF 427
            ....|..|||:...|.|      |.:...|...||:||..||.|:.  .||   |.|..|:.|:|
Mouse   183 PRPDSPTTTPNISVKKK------NKDGKGNTIYLWEFLLALLQDKATCPKY---IKWTQREKGIF 238

  Fly   428 KIVDPAGLAKLWGIQKNHLSMNYDKMSRALRYYYRVNILRKVQGERHCYQFLRNPTEL------- 485
            |:||...:::|||..||...|||:.|.|||||||:..||.||:|:|..|||...|.:|       
Mouse   239 KLVDSKAVSRLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPKDLIYIDDED 303

  Fly   486 --KNIKNISLLRQSTPANGN--------GGSPSMPQGSSQ--APGSPAGQNWNPQQQSQQQQQSP 538
              .:|::......||.|:..        ..||.:..|::.  .||:....|             |
Mouse   304 PSSSIESSDQSLSSTTASSRNQANRSRVSSSPGIKGGAATILKPGNSKAAN-------------P 355

  Fly   539 QRPASRNGPMSLPAVAAVAAAAAAAYGPPPTSPLFMHAINGAFHYLSAAAAGP------------ 591
            :.|.....|      :.|......:..|.||. ||.     ..|.:....|.|            
Mouse   356 KDPVEVGQP------SEVLRTVQPSQAPYPTQ-LFR-----TVHVVQPVQAVPEEATIASTMQEE 408

  Fly   592 PPNS--PALNTPSA------VGGPDKFQFH----PL-----KLENGSGSGSE------------- 626
            ..||  |::.|..|      |..|...|.|    ||     .::..||:||:             
Mouse   409 AANSSVPSIRTIQASTQVPVVVSPGNQQLHTVTVPLTTVIASIDPSSGAGSQKFILQTIPSSQPM 473

  Fly   627 ---------------SAGEDLKPTDLSVSSKSTATSNEDCYPLIRNADG---------LTTIKLI 667
                           |....|.||.:    :...|||...   |.|..|         .||..:.
Mouse   474 TVLKENVMLQSQKPGSPSIVLSPTQV----QQVLTSNVQS---ICNGAGSVASAPSFSATTPVVT 531

  Fly   668 RYNEHQVAASPAG---------QSPKHDDQQAGASNASSSPRPMDQASEQAQP-VPMESDCNGGE 722
            .....|:.|.|.|         |..|...|:.............:::::|.|| |.:.|..||..
Mouse   532 FSRSSQLVAHPPGTVITSVIKAQETKTLKQEVEKKAEDDLNEDAEKSAQQPQPYVMVLSSSNGFS 596

  Fly   723 SE 724
            |:
Mouse   597 SQ 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aopNP_001259908.1 SAM_PNT-Tel_Yan 49..116 CDD:176085
ETS 395..482 CDD:197710 42/88 (48%)
Elf1NP_001273340.1 Elf-1_N 2..111 CDD:372034 7/30 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..199 10/60 (17%)
ETS 207..289 CDD:197710 40/84 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..361 12/73 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 562..586 3/23 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3804
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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