Sequence 1: | XP_011539620.1 | Gene: | HSPG2 / 3339 | HGNCID: | 5273 | Length: | 4574 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001364664.1 | Gene: | unc-52 / 175126 | WormBaseID: | WBGene00006787 | Length: | 4075 | Species: | Caenorhabditis elegans |
Alignment Length: | 4753 | Identity: | 1093/4753 - (22%) |
---|---|---|---|
Similarity: | 1555/4753 - (32%) | Gaps: | 1841/4753 - (38%) |
- Green bases have known domain annotations that are detailed below.
Human 216 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPTFSLLVETTSLPPRPETTIM 280
Human 281 RQPPVTHAPQ---------------PLLPG-------------------------SVR------P 299
Human 300 LP------------------------C--------------------GPQEA------------- 307
Human 308 --ACRNGHCIPRDYLCDGQEDCEDGSDELDCGPPP---PCEPNEFPCGNGHCALKLWRCDGDFDC 367
Human 368 EDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPRES 432
Human 433 IQASRGQTVTFTCVAIGVPTPIINWRLNWGHIPSHPRVTVTSEGGRGTLIIRDVKESDQGAYTCE 497
Human 498 AMNARGMVFGIPDGVLELVPQRAGPCPDGHFYLEHSAACLPCFCFGITSVCQSTRRFRDQIRLRF 562
Human 563 DQPDDFKGVNVTMPAQPGTPPLSSTQLQIDPSLHEFQLVDLSRRFLVHDSFWALPEQFLGNKVDS 627
Human 628 YGGSLRYNVRYELARGMLEPVQRPDVVLMGAGYRLLSRGHTPTQPGALNQRQVQFSEEHWVHESG 692
Human 693 RPVQRAELLQVLQSLEAVLIQTVYNTKMASVGLSDIAMDTTVTHATSHGRAHSVEECRCPIGYSG 757
Human 758 LSCESCDAHFTRVPGGPYLGTCSGCNCNGHASSCDPVYGHCLNCQHNTEGPQCNKCKAGFFGDAM 822
Human 823 KATATSCRPCPCPYIDASRRFSDTCFLDTDGQATCDACAPGYTGRRCESCAPGYEGNPIQPGGKC 887
Human 888 RPVNQEIVRCDERGSMGTSGEACRCKNNVVGRLCNECADGSFHLSTRNPDGCLKCFCMGVSRHCT 952
Human 953 SSSWSRAQLHGASEEPGHFSLTNAASTHTTNEG--------------IFSPTP---GELGFSSFH 1000
Human 1001 RLLSG-PYFWSLPSRFLGDKVTSYGGELRFTVTQRSQPGSTPLHGQPLVVLQGNNIILEH----- 1059
Human 1060 -HVAQEPSPGQPSTFIVPFREQAWQRPDGQPATREHLLMALAGIDTLLIRASYAQQPAESRVSGI 1123
Human 1124 SMDVAVPEETGQDPALEVEQCSCPPGYRGPSCQDCDTGYTRTPSGLYLGTCERCSCHGHSEACEP 1188
Human 1189 ETGACQGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGDPAAGQAAHTCFLDTDGHPTCD 1253
Human 1254 ACSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDPQGSVSSQCDAAGQCQCKAQVE 1318
Human 1319 GLTCSHCRPHHFHLSASNPDGCLPCFCMGITQQCASSAYTRHLISTHFAPGDFQGFALVNPQRNS 1383
Human 1384 RLTGEFTVEPVPEGAQLSFGNFAQLGHESFYWQLPETYQGDKGEAYFARMRRAHQRTLPMALAPG 1448
Human 1449 LWEVLARLLPPFHQNRTSLSEEQLRAAVTAGRIPEPPEGRDWAQRASQVDEAQRRMDAEIWQLLS 1513
Human 1514 SFAAQPQPPPQGLSPHPQPAAALRAAPPPSSSSSSSSSSASLSFSPGSQFSLSYEGFSLLPGSLY 1578
Human 1579 YWQLPRAFLGDKVAAYGGKLRYTLSYTAGPQGSPLSDPDVQITGNNIMLVASQPALQGPERRSY- 1642
Human 1643 -------EIMFREEFWRRPDGQPATREHLLMALADLDELLIRATFSSVPLAASISAVSLEVAQPG 1700
Human 1701 PSNRPRALEVEECRCPPGYIGLSCQDCAPGYTRTGSGLYLGHCELCECNGHSDLCHPETGACSQC 1765
Human 1766 QHNAAGEFCELCAPGYYGDATAGTPEDCQ------PCACPLTNPENMFSRTCESLGAGGYRCTAC 1824
Human 1825 EPGYTGQYCEQCGPGYVGNPSVQGG--QCLPETNQAPLVVEVHPARSIVPQGGSHSLRCQVSGSP 1887
Human 1888 PHYFYWSREDG----RPVPSGTQQRHQGSELHFPSVQPSDAGVYICT-CR-NLHQSNTSRAELLV 1946
Human 1947 TEAPSKPITVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPTRAMDFNGILTIR 2011
Human 2012 NVQLSDAGTYVCTGSNMFAMDQGTATLHVQASGTLSAPVVSIHPPQLTVQPGQLAEFRCSATGSP 2076
Human 2077 TPTLEW----TGGPGGQLPAKAQIHGGILRLPAVEPTDQAQYLCRAHSSAGQ-QVARAVLHVHGG 2136
Human 2137 GGPRVQVSPERTQVHAGRTVRLYCRAAGVPSATITWRKEGGSLPPQARSERTDIATLLIPAITTA 2201
Human 2202 DAGFYLCVATSPAGTAQARIQVVVLSASDASPPPVKIESSSPSVTEGQTLDLNCVVAGSAHAQVT 2266
Human 2267 WYRRGGSLPPHTQVHGSRLRLPQVSPADSGEYVCRVENGSGPKEASITVSVLHGTHSGPSYTPVP 2331
Human 2332 GSTRPIRIEPSSSHVAEGQTLDLN------CVVPGQAHAQVTWHKRGG-SLPARHQTHGSLLRLH 2389
Human 2390 QVTPADSGEYVCHVVGTSGPLE----ASVLVTIEASVIPGPIPPVRIESSSSTVAEGQTLDLSCV 2450
Human 2451 VAGQAHAQVTWYKRG-GSLPARHQVRGSRLYIFQASPADAGQYVCRASNGMEASITVTVTGTQGA 2514
Human 2515 NLAYPAG--STQPIR--IEPSSSQVAEGQTLDLNCVVPGQSHAQVTWHKRGGSLPVRHQTHGSLL 2575
Human 2576 RLYQASPADSGEYVCRVLGSSVPLEASVLVTIEPAGSVPALGVTPTVRIESSSSQVAEGQTLDLN 2640
Human 2641 CLVAGQAHAQVTWHKRGGSLPARHQVHGSRLRLLQVTP-------ADSGEYVCRVVGSSGTQEAS 2698
Human 2699 VLVTIQQRLSGSHSQGVAYPVRIESSSASLANGHTLDLNCLVASQAPHTITWYKRGGSLPSRHQI 2763
Human 2764 VGSRLRIPQVTPADSGEYVCHVSNGAGSRETSLIVTIQGSGSSHVPSVSPPIRIESSSPTVVEGQ 2828
Human 2829 TLDLNCVVARQPQAIITWYKRGGSLPSRHQTHGSHLRLHQMSVADSGEYVCRANNNIDALEASIV 2893
Human 2894 ISVSPSAGSPSAPGSSMPIRIESSSSHVAEGETLDLNCVVPGQAHAQVTW--HKRGGSLPSHHQT 2956
Human 2957 RGSRLRLHHVSPADSGEYVCRVMGSSGPLEASVLVTIEASGSSAVHVPAPGGAPPIRIEPSSSRV 3021
Human 3022 AEGQTLDLKCVVPGQAHAQVTWHKRGGNLPARHQVHGPLLRLNQVSPADSGEYSCQVTGSSGTLE 3086
Human 3087 ASVLVTIEPSSPGPIPAPGLAQPIYIEASSSHVTEGQTLDLNCVVPGQAHAQVTWYKRGGS-LPA 3150
Human 3151 RHQTHGSQLRLHLVSPADSGEYVCRAASGPGPEQEASFTVTVPPSEGSSYRLRSPVISIDPPSST 3215
Human 3216 VQQGQDASFKCLIHDGAAPISLEWKTRNQELEDNVHISPNGSIITIVGTRPSNHGTYRCVASNAY 3280
Human 3281 GVAQSVVNLSVHGPPTVSVLPEGP-VWVKVGKAVTLECV---SAGEPRSSARWTRISSTPAKLEQ 3341
Human 3342 RTYGLMDSHAVLQISS---AKPS----DAGTYVCLAQNALGTAQKQ--VEVI----VDTGAMAPG 3393
Human 3394 APQ--VQAEEAELTVEAGHTATLRCSATGSP-APTIHWSKLRSPLPW---QHRLEGDTLIIPRVA 3452
Human 3453 QQDSGQYICNATSPAGHAEATII----LHVES-------PPYATTVPEHASVQAGETVQLQCLAH 3506
Human 3507 GTP-PLTFQWSRV-GSSLPGRATARNELLHFERAAP-EDSGRYRCRVTNKVGSAEAFAQLLVQGP 3568
Human 3569 PGSLPATSIPAGSTPTVQVTPQLETKSIGASVEFHCAVPSDRGTQLRWFKEGGQLPPGHSVQDGV 3633
Human 3634 LRIQNLDQSCQGTYICQA--HGPWGKAQASAQLVIQALPSVLINI--RTSVQTVVVGHAVEFECL 3694
Human 3695 ALGDPKPQVTWSKVGG-HLRPGIVQSGGVVRIAHVELADAGQYRCTATNAAGTTQSHVLLLVQAL 3758
Human 3759 PQ--------ISMPQEVRVPAGSAAVFPCI--ASGYPTPDISWSKLDGSLPPDSRLENNMLMLPS 3813
Human 3814 VRPQDAGTYVCTATNRQGKVKAFAHLQVPERVVPYFTQTPYSFLPLPTIKD-AYRKFEIKITFRP 3877
Human 3878 DSADGMLLYNGQKRVP-----GSPTNLANRQPDFISFGLVGGRPEFRFDAGSGMATIRHPTPLAL 3937
Human 3938 GHFHTVTLLRSLTQGSLIVGDLA--------PVNGTSQGKFQGLDLNEELYLGGYPDYGAIPKAG 3994
Human 3995 LSSGFIGCVRELRIQGEEIVFHDLNLTAHGISHCPTCRDRPCQNGGQCHDSES-SSYVCVCPAGF 4058
Human 4059 TGSRCEHSQALHCHPEACGPDATCVNRPDGRGYTCRCHLGRSGLRCEEGVTVTTP-SLSGAGSYL 4122
Human 4123 AL--PALTNTHHELRLDVEFKPLAPDG---VLLFSGGKSGPVEDFVSLAMVGGHLEFRYELGSGL 4182
Human 4183 AVLRSAEPLALGRWHRVSAERLNK----DGSLRVNGGRPVLRSSPGKSQGLNLHTL-----LYLG 4238
Human 4239 GVEPSVPLSPATNMSAHFRGCVGEVSVNGKRLDLTYSFLGSQG-IGQCYDS-------------- 4288
Human 4289 --------------------SPCERQPCQHGATC----------------------MPAGEYEFQ 4311
Human 4312 CLCRDG-------------------------------------FKGDLCEHEEN----------- 4328
Human 4329 --------------PCQLREPCLHG---------GTCQGTRCLCLPGFSGPRCQQGSGHGIAESD 4370
Human 4371 WHLEG-SGGNDAPGQYGAYFHDDGFLAFPGHVFSRSLPEVPETIELEVRTSTASGLLLWQGVEVG 4434
Human 4435 EAGQGKDFISLGLQDGHLVFRYQLGSGEARLVSEDPINDGEWHRVTALREGRRGSIQVDGEELVS 4499
Human 4500 GRSPGPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRAQ 4564
Human 4565 AGANTRPC 4572 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HSPG2 | XP_011539620.1 | SEA | 80..193 | CDD:214554 | |
LDLa | 216..251 | CDD:238060 | 17/34 (50%) | ||
LDLa | 302..336 | CDD:238060 | 20/68 (29%) | ||
LDLa | 342..376 | CDD:238060 | 20/33 (61%) | ||
LDLa | 385..420 | CDD:238060 | 18/34 (53%) | ||
IG | 431..507 | CDD:214652 | 42/75 (56%) | ||
Ig_Perlecan_D2_like | 438..515 | CDD:143220 | 42/76 (55%) | ||
LamB | 608..734 | CDD:214597 | 4/125 (3%) | ||
EGF_Lam | 782..824 | CDD:238012 | 3/41 (7%) | ||
EGF_Lam | 831..888 | CDD:238012 | 3/56 (5%) | ||
Laminin_EGF | 897..939 | CDD:278482 | 15/41 (37%) | ||
LamB | 1003..1130 | CDD:214597 | 50/133 (38%) | ||
EGF_Lam | 1176..1225 | CDD:238012 | 5/48 (10%) | ||
EGF_Lam | 1227..1282 | CDD:238012 | 0/54 (0%) | ||
Laminin_EGF | 1293..1340 | CDD:278482 | 19/46 (41%) | ||
LamB | 1574..1699 | CDD:214597 | 54/132 (41%) | ||
EGF_Lam | 1746..1794 | CDD:238012 | 27/47 (57%) | ||
Laminin_EGF | 1796..1851 | CDD:278482 | 19/56 (34%) | ||
Ig_2 | 1866..1958 | CDD:290606 | 15/97 (15%) | ||
IG_like | 1866..1946 | CDD:214653 | 13/85 (15%) | ||
Ig3_Perlecan_like | 1954..2039 | CDD:143231 | 9/84 (11%) | ||
IG | 1961..2040 | CDD:214652 | 7/78 (9%) | ||
I-set | 2049..2133 | CDD:254352 | 31/88 (35%) | ||
Ig | 2063..2133 | CDD:299845 | 24/74 (32%) | ||
I-set | 2139..2225 | CDD:254352 | 23/85 (27%) | ||
IGc2 | 2153..2215 | CDD:197706 | 18/61 (30%) | ||
IG_like | 2240..2317 | CDD:214653 | 5/76 (7%) | ||
IGc2 | 2247..2307 | CDD:197706 | 5/59 (8%) | ||
IG | 2341..2418 | CDD:214652 | 24/87 (28%) | ||
IGc2 | 2348..2408 | CDD:197706 | 21/66 (32%) | ||
IG_like | 2434..2508 | CDD:214653 | 20/74 (27%) | ||
IGc2 | 2441..2500 | CDD:197706 | 18/59 (31%) | ||
IG_like | 2530..2607 | CDD:214653 | 19/76 (25%) | ||
IGc2 | 2537..2595 | CDD:197706 | 17/57 (30%) | ||
I-set | 2620..2703 | CDD:254352 | 14/89 (16%) | ||
IGc2 | 2633..2693 | CDD:197706 | 12/66 (18%) | ||
IG | 2731..2800 | CDD:214652 | 13/68 (19%) | ||
IGc2 | 2731..2790 | CDD:197706 | 13/58 (22%) | ||
IG_like | 2819..2896 | CDD:214653 | 1/76 (1%) | ||
IGc2 | 2826..2885 | CDD:197706 | 0/58 (0%) | ||
IG | 2916..2993 | CDD:214652 | 18/78 (23%) | ||
IGc2 | 2923..2983 | CDD:197706 | 16/61 (26%) | ||
IG | 3016..3093 | CDD:214652 | 15/76 (20%) | ||
IGc2 | 3023..3083 | CDD:197706 | 14/59 (24%) | ||
Ig_2 | 3112..3192 | CDD:290606 | 9/80 (11%) | ||
IG_like | 3115..3192 | CDD:214653 | 9/77 (12%) | ||
I-set | 3205..3291 | CDD:254352 | 15/85 (18%) | ||
ig | 3209..3289 | CDD:278476 | 14/79 (18%) | ||
IG | 3303..3385 | CDD:214652 | 25/98 (26%) | ||
Ig | 3313..3382 | CDD:143165 | 18/80 (23%) | ||
IG | 3404..3478 | CDD:214652 | 21/81 (26%) | ||
IGc2 | 3409..3468 | CDD:197706 | 17/62 (27%) | ||
I-set | 3482..3565 | CDD:254352 | 22/85 (26%) | ||
IGc2 | 3496..3555 | CDD:197706 | 19/61 (31%) | ||
IG_like | 3589..3666 | CDD:214653 | 20/78 (26%) | ||
Ig | 3600..3666 | CDD:299845 | 18/67 (27%) | ||
I-set | 3676..3755 | CDD:254352 | 24/81 (30%) | ||
IGc2 | 3686..3745 | CDD:197706 | 19/59 (32%) | ||
I-set | 3764..3841 | CDD:254352 | 27/78 (35%) | ||
Ig | 3779..3834 | CDD:299845 | 21/56 (38%) | ||
LamG | 3848..4008 | CDD:238058 | 28/173 (16%) | ||
EGF_CA | <4035..4064 | CDD:238011 | 8/29 (28%) | ||
LamG | 4117..4266 | CDD:238058 | 30/162 (19%) | ||
EGF | 4291..4321 | CDD:278437 | 7/88 (8%) | ||
EGF_CA | 4328..4359 | CDD:238011 | 7/64 (11%) | ||
LamG | 4386..4545 | CDD:238058 | 58/158 (37%) | ||
unc-52 | NP_001364664.1 | LDLa | 125..156 | CDD:238060 | |
IG | <193..264 | CDD:214652 | |||
LDLa | 275..309 | CDD:238060 | |||
LDLa | 314..349 | CDD:238060 | |||
LDLa | 416..450 | CDD:238060 | |||
LDLa | 498..535 | CDD:238060 | |||
LDLa | 564..599 | CDD:238060 | |||
LDLa | 752..786 | CDD:238060 | 17/34 (50%) | ||
IgI_Perlecan_like | 834..919 | CDD:409412 | 7/84 (8%) | ||
Ig strand B | 851..855 | CDD:409412 | 0/3 (0%) | ||
Ig strand C | 867..871 | CDD:409412 | 2/3 (67%) | ||
Ig strand E | 886..890 | CDD:409412 | 0/3 (0%) | ||
Ig strand F | 900..905 | CDD:409412 | 1/4 (25%) | ||
Ig strand G | 913..916 | CDD:409412 | 0/2 (0%) | ||
Ldl_recept_a | 937..972 | CDD:395011 | 15/34 (44%) | ||
LDLa | 977..1013 | CDD:412164 | 20/35 (57%) | ||
Ldl_recept_a | 1020..1057 | CDD:395011 | 18/36 (50%) | ||
Ig_Perlecan_like | 1075..1152 | CDD:143220 | 42/76 (55%) | ||
Ig strand B | 1078..1082 | CDD:143220 | 0/3 (0%) | ||
Ig strand C | 1091..1095 | CDD:143220 | 2/3 (67%) | ||
Ig strand E | 1116..1120 | CDD:143220 | 3/3 (100%) | ||
Ig strand F | 1130..1135 | CDD:143220 | 4/4 (100%) | ||
Ig strand G | 1144..1147 | CDD:143220 | 0/2 (0%) | ||
EGF_Lam | 1172..1218 | CDD:214543 | 22/148 (15%) | ||
LamB | 1286..1413 | CDD:214597 | 50/132 (38%) | ||
Laminin_EGF | <1477..1511 | CDD:395007 | 17/33 (52%) | ||
LamB | 1578..1702 | CDD:214597 | 54/132 (41%) | ||
Laminin_EGF | 1748..1795 | CDD:395007 | 26/46 (57%) | ||
Laminin_EGF | 1804..1851 | CDD:395007 | 19/56 (34%) | ||
IG | 1932..2012 | CDD:214652 | 28/82 (34%) | ||
IG_like | 2023..2104 | CDD:214653 | 23/82 (28%) | ||
Ig strand A' | 2025..2029 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 2032..2042 | CDD:409353 | 2/9 (22%) | ||
Ig strand C | 2047..2054 | CDD:409353 | 1/6 (17%) | ||
Ig strand C' | 2055..2058 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 2067..2073 | CDD:409353 | 3/7 (43%) | ||
Ig strand F | 2080..2088 | CDD:409353 | 4/7 (57%) | ||
Ig | 2118..>2181 | CDD:416386 | 21/117 (18%) | ||
Ig strand A' | 2122..2126 | CDD:409353 | 2/58 (3%) | ||
Ig strand B | 2129..2139 | CDD:409353 | 2/9 (22%) | ||
Ig strand C | 2144..2151 | CDD:409353 | 2/6 (33%) | ||
Ig strand C' | 2152..2155 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 2163..2170 | CDD:409353 | 2/6 (33%) | ||
IG | 2212..2293 | CDD:214652 | 27/96 (28%) | ||
IG | 2303..2383 | CDD:214652 | 26/93 (28%) | ||
IG_like | 2404..2486 | CDD:214653 | 28/224 (13%) | ||
Ig strand A' | 2406..2409 | CDD:409353 | 0/2 (0%) | ||
Ig strand B | 2413..2423 | CDD:409353 | 3/9 (33%) | ||
Ig strand C | 2430..2434 | CDD:409353 | 2/3 (67%) | ||
Ig strand C' | 2436..2438 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 2444..2449 | CDD:409353 | 2/4 (50%) | ||
Ig strand E | 2450..2456 | CDD:409353 | 2/5 (40%) | ||
Ig strand F | 2463..2470 | CDD:409353 | 5/6 (83%) | ||
IG | 2499..2579 | CDD:214652 | 26/112 (23%) | ||
Ig | 2598..2671 | CDD:416386 | 34/245 (14%) | ||
Ig strand B | 2601..2610 | CDD:409353 | 4/29 (14%) | ||
Ig strand C | 2615..2622 | CDD:409353 | 3/39 (8%) | ||
Ig strand C' | 2624..2627 | CDD:409353 | 2/2 (100%) | ||
Ig strand F | 2650..2658 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 2661..2671 | CDD:409353 | 3/9 (33%) | ||
Ig_3 | 2673..2756 | CDD:404760 | 22/88 (25%) | ||
Ig strand B | 2694..2698 | CDD:409353 | 0/3 (0%) | ||
Ig strand C | 2710..2713 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 2736..2740 | CDD:409353 | 0/3 (0%) | ||
Ig strand F | 2750..2755 | CDD:409353 | 2/4 (50%) | ||
Ig strand G | 2763..2766 | CDD:409353 | 1/2 (50%) | ||
IG | 2880..2955 | CDD:214652 | 25/85 (29%) | ||
Ig | 2970..3043 | CDD:416386 | 19/76 (25%) | ||
Ig strand A' | 2971..2974 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 2978..2987 | CDD:409353 | 3/11 (27%) | ||
Ig strand C | 2993..2997 | CDD:409353 | 0/3 (0%) | ||
Ig strand C' | 2999..3001 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 3006..3011 | CDD:409353 | 0/4 (0%) | ||
Ig strand E | 3012..3018 | CDD:409353 | 1/5 (20%) | ||
Ig strand F | 3025..3033 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 3036..3043 | CDD:409353 | 0/6 (0%) | ||
Ig | 3067..3137 | CDD:416386 | 23/69 (33%) | ||
Ig strand B | 3070..3077 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 3083..3088 | CDD:409353 | 1/4 (25%) | ||
Ig strand D | 3097..3101 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 3103..3107 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 3116..3124 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 3127..3137 | CDD:409353 | 3/9 (33%) | ||
IG | 3154..3231 | CDD:214652 | 27/78 (35%) | ||
LamG | 3257..3394 | CDD:214598 | 24/153 (16%) | ||
EGF_CA | 3411..3448 | CDD:238011 | 8/36 (22%) | ||
LamG | 3513..3644 | CDD:214598 | 27/149 (18%) | ||
LamG | 3882..4040 | CDD:238058 | 58/158 (37%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 112 | 1.000 | Domainoid score | I4284 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H68473 | |
Inparanoid | 1 | 1.050 | 812 | 1.000 | Inparanoid score | I258 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S7730 |
OMA | 1 | 1.010 | - | - | QHG46672 | |
OrthoDB | 1 | 1.010 | - | - | D17288at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006846 | |
OrthoInspector | 1 | 1.000 | - | - | oto23317 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107789 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10574 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3412 |
SonicParanoid | 1 | 1.000 | - | - | X4935 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.960 |