DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBCD and tbcd

DIOPT Version :9

Sequence 1:NP_608648.1 Gene:TBCD / 33389 FlyBaseID:FBgn0027509 Length:1189 Species:Drosophila melanogaster
Sequence 2:XP_031750025.1 Gene:tbcd / 779832 XenbaseID:XB-GENE-493400 Length:1184 Species:Xenopus tropicalis


Alignment Length:1204 Identity:469/1204 - (38%)
Similarity:702/1204 - (58%) Gaps:74/1204 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EECKDEDLPA--NTLEHFTELQQVLEMIDNIKSIAANTFEREF--EQYAQVLSRYQEQPHLLDPH 66
            ||....|:.|  |.||.|.|.|:..::|.:::::......||.  :::..::.:|||||||||||
 Frog     9 EEDGSPDVIASGNILESFMENQETRDLIGSLRTVWQELVSREVCTQRFVVIMDKYQEQPHLLDPH 73

  Fly    67 LEELLGKLLHKIRKPDLDTGELHAAFKYLYIICKVRTYKVLVKFMPHELSDLEFVLDLLGQQNPK 131
            |:.:|..||..|:.........|.|||:||||.|||.||:.::..|||:.|::.||:::..|:||
 Frog    74 LDWMLNSLLEIIQDKASPPVLFHLAFKFLYIISKVRGYKIFLRLFPHEVVDVQPVLEMISAQDPK 138

  Fly   132 EFEQWETRYILLLWMSILVLNPFHMSRLDAYDTSTSAPTTNCSPVNHVQSKNTKMDRIFELIQLY 196
            :.|.|||||:||||:|:..|.||.:||||....|...|           .:...||.|.::.:.|
 Frog   139 DHETWETRYMLLLWLSMTCLIPFDLSRLDGNIASDLGP-----------KRKPTMDIILDVAKSY 192

  Fly   197 VSSNDTCSSMAAFLAAKYFIRSDIKDLYLERFLDWIMEQHQADTL-NVKF----------GQLAA 250
            :..:|.....||.|.:|:..|.|:|...:..||||.:     .|| |..:          |.|.|
 Frog   193 LVVSDKARDAAAVLVSKFITRPDVKQKRMADFLDWTL-----STLSNASYLTMEGTIAMDGMLQA 252

  Fly   251 VAAILKHGKREDLLPYADKLLQWITSCQYKDDNDFLKYKNYVKIIQRIGLVHLKPRIASWRYKRG 315
            :|.:.|||||||.||||..:|..:.:|...|.|..:..|...|::||:||..||.::|:|||:||
 Frog   253 LAQLFKHGKREDCLPYASIVLTCLDNCNLCDSNQTVLRKLGTKLVQRLGLTFLKTKVANWRYQRG 317

  Fly   316 TRSLATNLNQTTA--AGGEPVVLEQSLEEGEEIVVPDAIEEVIEELLQALRSGGNDIRWSAAKGL 378
            :|.||.||.|:::  ....|.:   ..||.|...:|:.||.|:|:||..|:.....:|||||||:
 Frog   318 SRCLAANLLQSSSDTQKSNPAL---PGEEEEAYDIPEEIENVVEQLLVGLKDKDTIVRWSAAKGI 379

  Fly   379 GRVTNRLPKELADEVIGSVIDILNPLEPHEAWHGACLALAELAKRGLLLPHRLEELVPLLMQALF 443
            ||:|.||||||||:|:|||:|..:..|.:.||||.|||||||.:||||||.||.::|||:::||.
 Frog   380 GRLTGRLPKELADDVVGSVLDCFSFQETNNAWHGGCLALAELGRRGLLLPSRLPDVVPLILKALV 444

  Fly   444 YDEMKGYMSVGQHIRDSACYMCWAFARAYNPDDVKPFVHKISSGLLTVAVFDREVNCRRAASAAF 508
            |||.:|..|||.::||:|||:||||||||:|.::.|||::|:|.|:..|||||:|||||||||||
 Frog   445 YDEKRGACSVGSNVRDAACYVCWAFARAYDPQEMNPFVNEIASALVIAAVFDRDVNCRRAASAAF 509

  Fly   509 QESVGRLGNFPFGIEISTTTDFYSVGIRQNSYLNISDYIAQFEVYREPLINHLVQHKVSHWDSAI 573
            ||:|||.|.||.||:|.||.|:::||.|.|.|||||.::|.|..|.:|:|:|||:.|::|||..:
 Frog   510 QENVGRQGTFPHGIDILTTADYFAVGNRANCYLNISVFVAGFPEYTKPMIDHLVEMKINHWDGVV 574

  Fly   574 RELTAKALHKLSLWEPEYMAAVVLPQLLAKTDTIDINCRHGCVLAMGEITLTLRKLEEKSD-PQV 637
            |||:.||||.|:...|:||...|||:||......|::.|||.:||..|||..:.||..:.: |..
 Frog   575 RELSTKALHNLTPTAPQYMTETVLPRLLPLAIGTDLHTRHGAILACAEITHAVYKLSAQCNRPLS 639

  Fly   638 VYLSNQRVAELNELIITFLDKNFYRGMSGDLMKSCTSSYIKNCSLAKLQATPECLV-SWQKVIDS 701
            .||:|:.:|.|..:.....::..|||:.|:||:......::..||::.....|.:: .|..:|.:
 Frog   640 DYLNNETLAGLAAIHPKLQERQLYRGLGGELMRPAVCCLVEKLSLSQFPHPGEDIIGGWLWLITN 704

  Fly   702 CL-------ITKSNAIRDGAVEAFGELCTTYYCSDSRHGENEAIINTYLTGADNDLEEHIRMGYI 759
            .|       .|....|::.||.|...||..||...:....::.:  ...|......||.:|.|:.
 Frog   705 SLKSLHLFSSTARQKIKEAAVSALSTLCQEYYKGRAAAAHDDLV--KQFTSELQSSEEMVRCGFS 767

  Fly   760 AALGVLPSFMIRCHLQAILDSLVKHSLTPLQAVLVGEMGDRENIQAYRWSEARTQSVLALTKLVK 824
            .|||.||.|:::..||.:|..|  ..:|.:....||            ::|:|..::.|:.::.:
 Frog   768 LALGALPQFLLKGRLQQVLGGL--RRVTSISGKDVG------------FAESRRDALRAIAQVCQ 818

  Fly   825 TVGY--GGGIDSFAEPKNFNKVIECLLRALQEYTLDNRGDIGAWVREAAMSSLYEI---VTTCPP 884
            |||.  .|..:.....:|...|...||..:.:||.|:|||:|||||||||:||.::   |.....
 Frog   819 TVGVRAEGSAEEAVCRENMALVYNTLLNCMNDYTTDSRGDVGAWVREAAMASLQDVTLLVAQTEA 883

  Fly   885 DLLAPEQVHEIVVGFMQQAVEKIDRTRGLGGRLCCQLIH-HQPRIPYIREHSKLLEIFP-ADADS 947
            |||.|:.|..::....||:.|||||.|...|.:...|:: ..|.:|::....:|..||| ..|:|
 Frog   884 DLLDPDFVQRMMCALSQQSAEKIDRYRAFAGSVFLNLLYFSDPPVPHVPHREELERIFPRTQAES 948

  Fly   948 VLWLFADHTFPLFCELLSLPDYSKRVLLGLSASIGQLTESLIKYASSALFHFLR---SNPETVPR 1009
            :.|......||...:||.|..|...||:||:.|:|.||||.::|::..||.:||   ::.|.:..
 Frog   949 LNWNAPSQAFPRITQLLGLATYRYYVLMGLTVSVGGLTESTVRYSAQGLFEYLRAIQNDTEQMDA 1013

  Fly  1010 LCSEVVQIFEEHLLNERVTYPLLSFLDILIGSGTVESVLHDEANPFAEDIFRLLNLEVKGYKKLY 1074
            ..:.::|:|.::...:||:.|||..||.::.:|..:....:|.:|||.|:..|...|:|..|.:.
 Frog  1014 FSASLLQVFRDNQHIDRVSIPLLKMLDQMLANGCFDIYTQEENHPFASDLLSLCREEIKRSKDIQ 1078

  Fly  1075 KTATSISAFCQLLQVP-RLSKRILSKLSVFLGLQHVHVRKTAATKLYEALALHGDVTEVPEENMD 1138
            |..:||:.||.|:|.| .:.|::|.:|.:.:......:|||.|:::||.|..:.||.|  .|.:|
 Frog  1079 KLRSSIAVFCGLIQFPGDIRKKVLFQLLLLVCHPFPRIRKTTASEVYEMLLTYDDVVE--PEILD 1141

  Fly  1139 EILTLLSETDWTQPLVEVRPLRNQLCQLMDIKPP 1172
            |::.:||::.|...|..||..||.||.|:.:..|
 Frog  1142 EVMAVLSDSTWDADLPTVREQRNHLCDLLKVPRP 1175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBCDNP_608648.1 TFCD_C 24..>584 CDD:303064 265/574 (46%)
HEAT repeat 355..383 CDD:293787 14/27 (52%)
HEAT repeat 393..423 CDD:293787 17/29 (59%)
TFCD_C 890..1075 CDD:289385 61/189 (32%)
tbcdXP_031750025.1 TFCD_C 47..981 CDD:418705 391/968 (40%)
TFCD_C 894..1079 CDD:403718 60/184 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 653 1.000 Domainoid score I155
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4368
Inparanoid 1 1.050 824 1.000 Inparanoid score I456
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D79003at2759
OrthoFinder 1 1.000 - - FOG0004779
OrthoInspector 1 1.000 - - oto105099
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3933
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.060

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