DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBCD and tbcd

DIOPT Version :9

Sequence 1:NP_608648.1 Gene:TBCD / 33389 FlyBaseID:FBgn0027509 Length:1189 Species:Drosophila melanogaster
Sequence 2:XP_001922584.2 Gene:tbcd / 553265 ZFINID:ZDB-GENE-060823-1 Length:1191 Species:Danio rerio


Alignment Length:1211 Identity:489/1211 - (40%)
Similarity:708/1211 - (58%) Gaps:72/1211 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SVEE--CKDED----LPANTLEHFTELQQVLEMIDNIKSIAANTFERE--FEQYAQVLSRYQEQP 60
            ||.|  |..||    ..|..|..|||..:...:|.::..|..:|..||  .|::..::.||||||
Zfish     2 SVMEGACNGEDAEVLAQACVLSEFTESTETRALISSLPDIHHDTVSREATIEKFVVIMDRYQEQP 66

  Fly    61 HLLDPHLEELLGKLLHKIRKPDLDTGELHAAFKYLYIICKVRTYKVLVKFMPHELSDLEFVLDLL 125
            ||||||||.:|..||..||........:|..||:||||.|||.||:.::..|||:||::.|||||
Zfish    67 HLLDPHLEWMLNMLLEMIRSEKSPPLLVHLCFKFLYIISKVRGYKIFMQLFPHEVSDVQPVLDLL 131

  Fly   126 GQQNPKEFEQWETRYILLLWMSILVLNPFHMSRLDAYDTSTSAPTTNCSPVNHVQSKNTKMDRIF 190
            .:|:.|:.|.||||||||||:|:..|.||.:||||.:  .::.|.||         :.:.||||.
Zfish   132 CRQDQKDTETWETRYILLLWLSMTCLIPFDLSRLDGH--LSTVPGTN---------RESTMDRIL 185

  Fly   191 ELIQLYVSSNDTCSSMAAFLAAKYFIRSDIKDLYLERFLDWIM---EQHQADTLN---VKFGQLA 249
            |:.:.::..:|.....|:.|.:|:..|.|:|...|..||||.:   .|....|:.   :..|.|.
Zfish   186 EVAKSFLRVSDKSRDAASVLVSKFVTRPDVKQKRLGDFLDWCLTTISQSSEMTMEGTVILDGALQ 250

  Fly   250 AVAAILKHGKREDLLPYADKLLQWITSCQYKDDNDFLKYKNYVKIIQRIGLVHLKPRIASWRYKR 314
            ::|.:.|||||:|.|.||..:|:.:...:..:.|.....|..||::||:||..||||:|.|||:|
Zfish   251 SLAQLFKHGKRDDFLQYAPTVLECLNQKKIAESNQATLRKLGVKVVQRLGLTFLKPRLAKWRYQR 315

  Fly   315 GTRSLATNLNQTTAA----GGEPVVLEQSLEEGEEIVVPDAIEEVIEELLQALRSGGNDIRWSAA 375
            |:||||.||.|::..    ..:|.:  :|:.:.|:..:|..:|.|||:||..|:.....:|||:|
Zfish   316 GSRSLAVNLAQSSVTESVEATKPDL--ESVSQEEDYDIPQEVENVIEQLLLGLKDKETIVRWSSA 378

  Fly   376 KGLGRVTNRLPKELADEVIGSVIDILNPLEPHEAWHGACLALAELAKRGLLLPHRLEELVPLLMQ 440
            ||:||||.||||||||:|:.||:|..:..|...||||.|||||||.:||||||.||.::|||:::
Zfish   379 KGIGRVTGRLPKELADDVVESVLDCFSFQETDNAWHGGCLALAELGRRGLLLPSRLSDVVPLILK 443

  Fly   441 ALFYDEMKGYMSVGQHIRDSACYMCWAFARAYNPDDVKPFVHKISSGLLTVAVFDREVNCRRAAS 505
            ||.|||.:|..|:|.::||:.||:||||||||.|.::||:|::|:|.|:...||||.|.||:|||
Zfish   444 ALTYDEKRGACSLGSNVRDAGCYVCWAFARAYEPTELKPYVNQIASSLVIATVFDRNVTCRKAAS 508

  Fly   506 AAFQESVGRLGNFPFGIEISTTTDFYSVGIRQNSYLNISDYIAQFEVYREPLINHLVQHKVSHWD 570
            |||||:|||.|.||.||:|.|..|:::||...|.||.||.|||.||.|.:|||:|||..|::|||
Zfish   509 AAFQENVGRQGTFPHGIDIITAADYFTVGNLNNCYLTISVYIAGFEEYTKPLIDHLVAMKINHWD 573

  Fly   571 SAIRELTAKALHKLSLWEPEYMAAVVLPQLLAKTDTIDINCRHGCVLAMGEITLTLRKLEEKSDP 635
            .|||||..||||.|::..|||||..||||||.....:|::.|||.:||..|||..|.||..:::.
Zfish   574 GAIRELATKALHNLTIQAPEYMANTVLPQLLPMATGMDLHSRHGAILACAEITHALYKLAAQNNR 638

  Fly   636 QVV-YLSNQRVAELNELIITFLDKNFYRGMSGDLMKSCTSSYIKNCSLAKLQATPECLVS-WQKV 698
            .|. .:|:..:..|.::.....|:..|||..|:||:....|.|:..||:|:....|.::: ||.:
Zfish   639 SVTDLMSSDTIEGLKDIHQKLSDRKQYRGFGGELMRPAVCSLIEKLSLSKMPFKDEPVIAGWQWL 703

  Fly   699 IDSCL----ITKS---NAIRDGAVEAFGELCTTYYCSDSRHGE---NEAIINTYLTGADNDLEEH 753
            ||..|    :..|   ..|:|.||.|...||..||..:....:   .|.:::.||:...:. |..
Zfish   704 IDDSLKNLHLFSSGVRRGIQDAAVSALAALCWQYYQVEPGVADVKMQEELVSQYLSALQSP-EVL 767

  Fly   754 IRMGYIAALGVLPSFMIRCHLQAILDSLVKHSLTPLQAVL-VGEMGDRENIQAYRWSEARTQSVL 817
            .|.|...|||.||.|||...||.||..        |||.. |.:.|:       ..:|||..:..
Zfish   768 TRCGCALALGSLPPFMIHNKLQQILSG--------LQATCRVAQKGE-------SLTEARRDAAT 817

  Fly   818 ALTKLVKTVGY--GGGIDSFAEPKNFNKVIECLLRALQEYTLDNRGDIGAWVREAAMSSLYEI-- 878
            |::::...||.  .|..|......|...|.|.||..:.:|:.|:|||:|||||.||||||.::  
Zfish   818 AMSQVCVAVGVCAQGRSDQVLCEDNIRPVYEALLGCMNDYSTDSRGDVGAWVRAAAMSSLMDVTL 882

  Fly   879 -VTTCPPDLLAPEQVHEIVVGFMQQAVEKIDRTRGLGGRLCCQLIH-HQPRIPYIREHSKLLEIF 941
             |....|:||:.:.|..::....|||.|||||.|...|.:..:|:| ..|.:|:|..|.:||.||
Zfish   883 LVVASAPELLSSDLVLRMMCCLAQQAAEKIDRYRAHAGTVFLRLLHGTDPAVPHIPHHEELLSIF 947

  Fly   942 PAD-ADSVLWLFADHTFPLFCELLSLPDYSKRVLLGLSASIGQLTESLIKYASSALFHFLRSNPE 1005
            |.: .:|:.|..|...||...:||.||.|....||||..|:|.||||.::::|.:||.:|:...:
Zfish   948 PPETGNSLNWNAASQAFPHITQLLRLPQYQYHTLLGLCVSVGGLTESTVRFSSQSLFDYLKGIQQ 1012

  Fly  1006 ---TVPRLCSEVVQIFEEHLLNERVTYPLLSFLDILIGSGTVESVLHDEANPFAEDIFRLLNLEV 1067
               .:.:....:::||.::|.|:||:.|||..:|.::.:|..:.....|::||..::..|...|:
Zfish  1013 DFTMLQQFGDTLLRIFRDNLRNDRVSVPLLKMVDQILANGCFDLFTRQESHPFCVELLSLCKEEI 1077

  Fly  1068 KGYKKLYKTATSISAFCQLLQVP-RLSKRILSKLSVFLGLQHVHVRKTAATKLYEALALHGDVTE 1131
            |..|.:.|..:.|:.||.|:|.| .:.|::|.:|.:.|......:|||.|:::||.|..:.||.|
Zfish  1078 KKSKDVQKLLSCIAVFCGLVQFPGDVRKKVLVQLLMLLCHPFPLIRKTTASQVYEMLLTYDDVIE 1142

  Fly  1132 VPEENMDEILTLLSETDWTQPLVEVRPLRNQLCQLMDIKPP 1172
             .|:.:.:::..||:|:|...:..||..|||||..:.:..|
Zfish  1143 -DEQVLADVMASLSDTNWESDIATVRSHRNQLCDWLGVPKP 1182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBCDNP_608648.1 TFCD_C 24..>584 CDD:303064 269/571 (47%)
HEAT repeat 355..383 CDD:293787 15/27 (56%)
HEAT repeat 393..423 CDD:293787 16/29 (55%)
TFCD_C 890..1075 CDD:289385 64/189 (34%)
tbcdXP_001922584.2 TFCD_C 27..>556 CDD:303064 250/541 (46%)
TFCD_C 895..1085 CDD:289385 64/189 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577678
Domainoid 1 1.000 661 1.000 Domainoid score I147
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4368
Inparanoid 1 1.050 825 1.000 Inparanoid score I451
OMA 1 1.010 - - QHG55142
OrthoDB 1 1.010 - - D79003at2759
OrthoFinder 1 1.000 - - FOG0004779
OrthoInspector 1 1.000 - - oto41178
orthoMCL 1 0.900 - - OOG6_102599
Panther 1 1.100 - - LDO PTHR12658
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3933
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.910

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