DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBCD and alp1

DIOPT Version :9

Sequence 1:NP_608648.1 Gene:TBCD / 33389 FlyBaseID:FBgn0027509 Length:1189 Species:Drosophila melanogaster
Sequence 2:NP_596393.2 Gene:alp1 / 2539669 PomBaseID:SPBC11C11.04c Length:1105 Species:Schizosaccharomyces pombe


Alignment Length:1274 Identity:291/1274 - (22%)
Similarity:504/1274 - (39%) Gaps:303/1274 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DEDLPANTLEHFTELQQVLE------MIDNIKSIAANTFEREFEQYAQVLSRYQEQPHLLDPHLE 68
            ||.|..:.|...  |..||:      .::.:|.:|.     ::.|:.|.      ||.|||..|.
pombe    14 DESLITSRLSQI--LDDVLDDRSSSHSVEKLKDVAV-----KYLQFCQF------QPTLLDKLLS 65

  Fly    69 EL---LGKLLHKIRKPDLDTGELHAAFKYLYIICKVRTYKVLVKFMPHELSDLEFVLDLLGQQNP 130
            :.   |...|.|::    :.|:.::....||..||:|.||.:....|   ..::::.:|....|.
pombe    66 KYVPNLASYLLKVK----NIGKCNSITVILYQFCKIRGYKAVRVLFP---VGVQYIKELYTLLNE 123

  Fly   131 KEFEQWETRYILLLWMSILVLNPFHMSRLDAYDTSTSAPTTNCSPVNHVQSKNTKMDRIFELIQL 195
            .....|...||:|||:|..:..||.::.||                :.:..|.|    |:.:...
pombe   124 SSNNTWHFHYIVLLWLSQALNTPFPLNSLD----------------DSLDVKKT----IYTIAIK 168

  Fly   196 YVSSNDTCSSMAAFLAAKYFIRSDIKDLYLERFLDWIMEQHQADTLNVKFGQLAAVAAILKHGKR 260
            |:.::......:..:.::.|.|.|..||.| .||..........::..|.|.|.::::.||...|
pombe   169 YLENSGIDKEASCLVLSRLFSRDDGLDLLL-GFLHHCESSWFKRSIFYKIGCLFSLSSFLKICPR 232

  Fly   261 EDLLPYADKLLQWITSCQ---YKDDNDFLKYKNYVKIIQRIGLVHLKPRIA-SWRYKRGTRSLAT 321
            .|.|...|...|::...:   ...:|..|: |...|...|:|:|.|....: :|:|.........
pombe   233 NDCLQTVDVAFQFLNVAREDLVGQENSALR-KLLCKCYTRLGIVLLPVNSSPNWKYSISNPDSFF 296

  Fly   322 NLNQTTAAGGEPVVLEQSLEEGEEIVVPDAIEEVIEELLQALRSGGNDIRWSAAKGLGRVTNRLP 386
            .|..               :..||:.:  .:|.:::.||.::....:.:||||||||.::.:|||
pombe   297 QLPD---------------DSNEEVHI--YLEVIVDFLLSSVSDIDSFVRWSAAKGLAKIISRLP 344

  Fly   387 KELADEVIGSVIDI------LNPLE--------PHEAWHGACLALAELAKRGLLLPHRLEELVPL 437
            ..||::||.::|::      |||:|        ....||||.|..|:||..||:...:...::||
pombe   345 WNLAEQVIDAIIELMTENMFLNPIENTVNISITSPLVWHGAILFFAKLAGAGLIKYSKCLHILPL 409

  Fly   438 LMQALFYDEMKGYMSVGQHIRDSACYMCWAFARAYNPDDVKPFVHKISSGLLTVAVFDREVNCRR 502
            :...|.|:...|....||.|||::||..|:|...|:...::.....:...||...:||.|:|.||
pombe   410 IEVGLSYEVRYGTRVTGQSIRDASCYFVWSFYHCYSKSAIEGLQTNLILCLLQTVLFDNEINVRR 474

  Fly   503 AASAAFQESVGRLGNFPFGIEISTTTDFYSVGIRQNSYLNISDYIAQFEVYREPLINHLVQHKVS 567
            ||:||..|.:||..:.|.|:.:.:..::.||....|.|.::...:|.|..:|..:...|..: :.
pombe   475 AATAALFEVIGRHASIPDGLSLISHINYVSVTDISNCYGDLCMKVAHFPQFRSCVFQRLFTN-LQ 538

  Fly   568 HWDSAIRELTAKALHKLSLWEPEYMAAVVLPQLL-----AKTDTI-------------------- 607
            |||..:::|:|.:|.:||:..|:.: ::.||.:|     ...|.|                    
pombe   539 HWDVKVQQLSAFSLRQLSIKYPKEL-SIYLPPILDYLSVGNADFIFGYTIGLASIIGGFLSISFP 602

  Fly   608 -DINCRHGCVLAMGEITLTLRKLEEKSDPQV----------VYLSNQRV-----AELNELIITFL 656
             |||..|.  |...:..|:|:|...:...::          ::.::.||     :|...:||..:
pombe   603 FDINRIHD--LLSHKNLLSLKKFSRQQQTKIILGILKGIQQIFANDIRVDRAFFSEAFSVIIAAI 665

  Fly   657 DKNFYRGMSGDLMKSCTSSYIKNCSLAKLQATPECLVSWQKVIDSCLITKSNAIRDGAVEAFGEL 721
            |.     ....::|..:.:|........::.|.|.|:.:              ||.         
pombe   666 DL-----QEETIIKDISDAYSVLVKFDDMEETLEVLLDY--------------IRK--------- 702

  Fly   722 CTTYYCSDSRHGENEAIINTYLTGADNDLEEHIRMGYIAALGVLPSFMIR-----CHLQAILDSL 781
                 ||.|:..                     |:.|| .|..||:...|     |.|  :||..
pombe   703 -----CSTSKEA---------------------RIVYI-ILQNLPNISFRYQKKICKL--LLDIY 738

  Fly   782 VK-HSLTPLQAVLVGEMGDRENIQAYRWSEARTQSVLALTKLVKTVGYGGGIDSFAEPKNFNKVI 845
            .: ||: ..||.:...:                |:::..|              :.:.::..:.:
pombe   739 PQLHSI-DYQAPVANAL----------------QNIIPFT--------------YEKTESIEEFV 772

  Fly   846 ECLLRALQEYTLDNRGDIGAWVREAAMSSLYEIVTTCPPDLLAPEQVHEIVVGF-MQQAVEKIDR 909
            :.||:....|..|.|||:|:|:|:.||.::..::..........|.:....:.: ::|..:|||.
pombe   773 KELLQVCSNYLTDTRGDVGSWIRKPAMKAISSLLVKDSSGKKLSEDIVWCCISYIIRQTFDKIDS 837

  Fly   910 TRGLGGRLCCQLIHHQPRIPY-IREHSKLLEIF------PADADSVLWLFADHTFPLFCELLSLP 967
            .|||..:...|:     |:.| ||....|..|.      |.....||       ..|...||.:|
pombe   838 LRGLAYQALEQI-----RVHYLIRRCEALTNIINRIRNNPNMDGEVL-------NELNISLLEIP 890

  Fly   968 DYSKRVLLGLSASIG---------QLTESLIKYASSALFHFLRSNPETVPRLCSEVVQIFEEHLL 1023
            :...:...|::....         :..|..:.|.......|.:||.....|   :::|::.:.|.
pombe   891 NLRLQAFYGITVFTADGFGSDLAVKCFEFYLSYVYQLEDSFKKSNSRYGKR---DLLQLYIDILS 952

  Fly  1024 NE----RVTYPLLSFLDILIGSGTVESVLHDEANPFAEDIFRLLNLEVKGYKKLY---------- 1074
            :|    |..:|::.....|:..|    ...|..|             |||..|..          
pombe   953 SEDEIARFYFPIMKSFTSLLAYG----CFTDFQN-------------VKGMSKAIFIVQRRALTC 1000

  Fly  1075 KTATSISAFCQLLQVPRLSKRIL-----SKLSVFLGLQHVH-VRKTAATKLYEALALHGDVTEVP 1133
            |:...:||..:|.:...|||..|     .|.:..|.|..:. ||..||..|..|.:: |.:|.:|
pombe  1001 KSPGGLSAILELYRTLFLSKNELLRHHALKYTANLLLNPIEKVRYQAADTLLYAKSI-GLLTFLP 1064

  Fly  1134 EENMDEILTLLSETDWTQPLVE----VRPLRNQLCQLMD 1168
            .|...::|||    ||..|:.:    |:.|||.:.:.:|
pombe  1065 NELNQKLLTL----DWFVPVSQNATFVKQLRNIIQKQID 1099

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBCDNP_608648.1 TFCD_C 24..>584 CDD:303064 152/586 (26%)
HEAT repeat 355..383 CDD:293787 10/27 (37%)
HEAT repeat 393..423 CDD:293787 15/43 (35%)
TFCD_C 890..1075 CDD:289385 42/215 (20%)
alp1NP_596393.2 CIN1 13..1105 CDD:227559 291/1274 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 224 1.000 Domainoid score I532
eggNOG 1 0.900 - - E1_COG2116
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 234 1.000 Inparanoid score I843
OMA 1 1.010 - - QHG55142
OrthoFinder 1 1.000 - - FOG0004779
OrthoInspector 1 1.000 - - oto101936
orthoMCL 1 0.900 - - OOG6_102599
Panther 1 1.100 - - LDO PTHR12658
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R52
SonicParanoid 1 1.000 - - X3933
TreeFam 1 0.960 - -
1312.860

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