DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBCD and Tbcd

DIOPT Version :9

Sequence 1:NP_608648.1 Gene:TBCD / 33389 FlyBaseID:FBgn0027509 Length:1189 Species:Drosophila melanogaster
Sequence 2:NP_084154.1 Gene:Tbcd / 108903 MGIID:1919686 Length:1196 Species:Mus musculus


Alignment Length:1216 Identity:482/1216 - (39%)
Similarity:717/1216 - (58%) Gaps:84/1216 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SNSVEECKDEDL-PANTLEHFTELQQVLEMIDNIKSIAANTFEREF--EQYAQVLSRYQEQPHLL 63
            |.:.||.:|:.| .|:.||.|.|..:...::.::.::......||.  |::..::.:||||||||
Mouse    10 SAAEEEVEDDALVRASALEAFGESAETRALLRSLPAVHRERASREVAEERFRVIMDKYQEQPHLL 74

  Fly    64 DPHLEELLGKLLHKIRK----PDLDTGELHAAFKYLYIICKVRTYKVLVKFMPHELSDLEFVLDL 124
            |||||.::..||..::.    |||    :|.|||:||||.|||.|||.::..|||:::::.|||:
Mouse    75 DPHLEWMMNSLLDLVQDETSLPDL----VHLAFKFLYIITKVRGYKVFLRLFPHEVANVQPVLDM 135

  Fly   125 LGQQNPKEFEQWETRYILLLWMSILVLNPFHMSRLDA-YDTSTSAPTTNCSPVNHVQSKNTKMDR 188
            ...||||:.|.|||||:||||:|:..|.||..||||. ..|.|.            :::...|||
Mouse   136 FTGQNPKDHETWETRYMLLLWLSVTCLIPFDFSRLDGNLSTQTG------------ETRVPTMDR 188

  Fly   189 IFELIQLYVSSNDTCSSMAAFLAAKYFIRSDIKDLYLERFLDW---IMEQHQADTLN---VKFGQ 247
            |.::.:.|:..:|.....||.|.:|:..|.|:|...:..||||   .:......|:.   ...|.
Mouse   189 ILQIAESYLVVSDKARDAAAVLVSKFITRPDVKQRKMASFLDWSLCTLAHSSFQTIEGVITMDGM 253

  Fly   248 LAAVAAILKHGKREDLLPYADKLLQWITSCQYKDDNDFLKYKNYVKIIQRIGLVHLKPRIASWRY 312
            |.|:|.|.|||||||.||||:.:||.:..|:..:.:.....|..||::||:||..|||::|:|||
Mouse   254 LQALAQIFKHGKREDCLPYANTVLQCLDGCRLPESSHTSLRKLGVKLVQRLGLTFLKPKVATWRY 318

  Fly   313 KRGTRSLATNLNQTTAAGGEPVVLEQSL--EEGEEIVVPDAIEEVIEELLQALRSGGNDIRWSAA 375
            :||.||||.||........:..:|..||  :..|:..||:.:|.|||:||..|:.....:|||||
Mouse   319 QRGCRSLAANLKLCAPGKSDQKLLSDSLTSDGDEDYDVPEGVETVIEQLLVGLKDKDTVVRWSAA 383

  Fly   376 KGLGRVTNRLPKELADEVIGSVIDILNPLEPHEAWHGACLALAELAKRGLLLPHRLEELVPLLMQ 440
            ||:||:..|||:||||:|:|||:|..:..|..:||||.|||||||.:||||||.||.|:|.::::
Mouse   384 KGIGRMAGRLPRELADDVVGSVLDCFSFQETDKAWHGGCLALAELGRRGLLLPSRLSEVVTVILK 448

  Fly   441 ALFYDEMKGYMSVGQHIRDSACYMCWAFARAYNPDDVKPFVHKISSGLLTVAVFDREVNCRRAAS 505
            ||.|||.:|..|||.::||:|||:||||||||.|.::.|||..|||.|:..|||||.||||||||
Mouse   449 ALTYDEKRGACSVGANVRDAACYVCWAFARAYEPQELTPFVTAISSALVIAAVFDRNVNCRRAAS 513

  Fly   506 AAFQESVGRLGNFPFGIEISTTTDFYSVGIRQNSYLNISDYIAQFEVYREPLINHLVQHKVSHWD 570
            |||||:|||.|.||.||:|.||.|:::||...|.:|.||.:||.|:.|.:|:|:|||..|::|||
Mouse   514 AAFQENVGRQGTFPHGIDILTTADYFAVGNISNCFLIISVFIAGFQEYTKPMIDHLVSMKINHWD 578

  Fly   571 SAIRELTAKALHKLSLWEPEYMAAVVLPQLLAKTDTIDINCRHGCVLAMGEITLTLRKLEEKSDP 635
            .|||||:|||||.|:...|||:|..|.|.||..|.:.|::.|||.:||..|:|..|.||..:|:.
Mouse   579 GAIRELSAKALHNLTPQVPEYIAMHVFPALLLMTQSPDLHTRHGAILACAEVTYALYKLATQSNR 643

  Fly   636 QVV-YLSNQRVAELNELIITFLDKNFYRGMSGDLMKSCTSSYIKNCSLAKL----QATPECLVSW 695
            .|. ||..:.|..|.::.....|::.|||:.|:||:......|:..||:::    .||.|   .|
Mouse   644 LVTDYLDEKAVQSLKQIHQQLCDRHLYRGLGGELMRQAVCILIEKLSLSRMPFKGDATVE---GW 705

  Fly   696 QKVIDSCL----ITKSNA---IRDGAVEAFGELCTTYYCSDSRHGE-----NEAIINTYLTGADN 748
            |.:|:..|    :..|::   |::.||.|...||:.||..:.  ||     .:.:|..||....:
Mouse   706 QWLINDTLRSLHLVSSHSRQQIKEVAVSALTALCSEYYVKEP--GEAGSSIAKELIPQYLAELQS 768

  Fly   749 DLEEHIRMGYIAALGVLPSFMIRCHLQAILDSLVKHS-LTPLQAVLVGEMGDRENIQAYRWSEAR 812
            . ||..|.|:.:|||.||.|::|.|||.:|..|.:.: ::|               ....::|||
Mouse   769 P-EEMARCGFSSALGALPGFLLRGHLQQVLSGLRRVTCISP---------------NDVSFAEAR 817

  Fly   813 TQSVLALTKLVKTVGYG--GGIDSFAEPKNFNKVIECLLRALQEYTLDNRGDIGAWVREAAMSSL 875
            ...:.|::::.:|||..  |..|.....:|.::|...||..:.:||.|:|||:|||||||||:||
Mouse   818 RDGLKAISRICQTVGVNTRGPPDEVICKENISEVYAALLGCMSDYTTDSRGDVGAWVREAAMTSL 882

  Fly   876 YE---IVTTCPPDLLAPEQVHEIVVGFMQQAVEKIDRTRGLGGRLCCQLIH-HQPRIPYIREHSK 936
            .:   ::....|.|:.......::....|||.|||||.|....|:...|:| ..|.||::....:
Mouse   883 MDLMLLLARTEPVLIEAHICERVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQE 947

  Fly   937 LLEIFP-ADADSVLWLFADHTFPLFCELLSLPDYSKRVLLGLSASIGQLTESLIKYASSALFHFL 1000
            |..:|| :|..:|.|......|||..:||.||.|...|||||:.|:|.||||.:::::.:||.::
Mouse   948 LESLFPRSDVATVNWNAPSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYM 1012

  Fly  1001 R---SNPETVPRLCSEVVQIFEEHLLNERVTYPLLSFLDILIGSGTVESVLHDEANPFAEDIFRL 1062
            :   .:.:.:......::::||::|||:||:..||..||.|:.:|..:....:|.:||...:..|
Mouse  1013 KGIQKDAQVLQSFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTL 1077

  Fly  1063 LNLEVKGYKKLYKTATSISAFCQLLQV-PRLSKRILSKLSVFLGLQHVHVRKTAATKLYEALALH 1126
            ...|:|..|.:.|..:||:..|.::|. ..:.|:||.:|.:.||.....:||:.|:::||.:..:
Mouse  1078 CKEEIKKSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTY 1142

  Fly  1127 GDVTEVPEENMDEILTLLSETDWTQPLVEVRPLRNQLCQLMDIKPP 1172
            .|:  |..|.:||::::||:|.|...|..||..||:||.|:.:..|
Mouse  1143 SDL--VDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRP 1186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBCDNP_608648.1 TFCD_C 24..>584 CDD:303064 269/574 (47%)
HEAT repeat 355..383 CDD:293787 15/27 (56%)
HEAT repeat 393..423 CDD:293787 17/29 (59%)
TFCD_C 890..1075 CDD:289385 62/189 (33%)
TbcdNP_084154.1 TFCD_C 63..>887 CDD:303064 371/860 (43%)
HEAT 1 363..401 22/37 (59%)
HEAT 2 599..634 15/34 (44%)
HEAT 3 752..788 12/36 (33%)
TFCD_C 900..1090 CDD:289385 62/189 (33%)
HEAT 4 1106..1142 11/35 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834668
Domainoid 1 1.000 655 1.000 Domainoid score I157
eggNOG 1 0.900 - - E1_COG2116
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4368
Inparanoid 1 1.050 820 1.000 Inparanoid score I470
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55142
OrthoDB 1 1.010 - - D79003at2759
OrthoFinder 1 1.000 - - FOG0004779
OrthoInspector 1 1.000 - - oto94897
orthoMCL 1 0.900 - - OOG6_102599
Panther 1 1.100 - - LDO PTHR12658
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R52
SonicParanoid 1 1.000 - - X3933
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

Return to query results.
Submit another query.