DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyP and pygma

DIOPT Version :9

Sequence 1:NP_001027219.1 Gene:GlyP / 33386 FlyBaseID:FBgn0004507 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_001018464.1 Gene:pygma / 553655 ZFINID:ZDB-GENE-050522-482 Length:842 Species:Danio rerio


Alignment Length:840 Identity:624/840 - (74%)
Similarity:721/840 - (85%) Gaps:0/840 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKPQSDADRRKQISVRGIAEVGNVTEVKKNFNRHLHYTLVKDRNVSTLRDYYFALANTVKDNMV 65
            ||||.||.||:|||||||:|.|.||.::|.|||||||:||||||||||.||||||||:||:|::|
Zfish     1 MSKPLSDHDRKKQISVRGLAGVENVADLKTNFNRHLHFTLVKDRNVSTKRDYYFALAHTVRDHLV 65

  Fly    66 GRWIRTQQHYYEKDPKRVYYLSLEYYMGRSLTNTMINLGIQSECEEAMYQLGLDIENLEEMEEDA 130
            ||||||||.|||||||||||:|||:||||:|.|||:||.:::.|:||.||||||:|.|:||||||
Zfish    66 GRWIRTQQSYYEKDPKRVYYISLEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELQEMEEDA 130

  Fly   131 GLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFAQKIKNGEQVEEPDDWLRYGNPWEKARP 195
            |||||||||||||||||||:|||||||||||||:|||.|||.||.||||.|||||||||||||||
Zfish   131 GLGNGGLGRLAACFLDSMASLGLAAYGYGIRYEFGIFNQKISNGWQVEEADDWLRYGNPWEKARP 195

  Fly   196 EFMLPVNFYGRVIDTPEGKKWVDTQRVFAMPYDNPIPGYNNNHVNTLRLWSAKSPIDFNLKFFND 260
            |:|.||:||||....|:|.||||||.|.|:|||.|:|||.||.|||:||||||:|.:||||.||.
Zfish   196 EYMRPVHFYGRTEHHPDGVKWVDTQVVLALPYDTPVPGYRNNIVNTMRLWSAKAPCEFNLKDFNV 260

  Fly   261 GDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFMCAATLQDIIRRYKASKFGSREAVRN 325
            |.|||||||||||||||||||||||||||||||||||||:.||||||||||:||||||||:.||.
Zfish   261 GGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSRDIVRT 325

  Fly   326 TFDHFPDKVAIQLNDTHPSLAIPELMRILVDEEHLTWEKAWDITVRSCAYTNHTVLPEALERWPV 390
            .|...|||||||||||||:||||||||:|||||.|.|||||||.||:|||||||||||||||||:
Zfish   326 DFSTLPDKVAIQLNDTHPALAIPELMRVLVDEEKLPWEKAWDICVRTCAYTNHTVLPEALERWPI 390

  Fly   391 SLLESILPRHLQIIYHINFLHMENVKKKFPDDLDRMRRMSMVEEDGEKRINMAHLSIVGSHAVNG 455
            .|.:::|||||:|||.||..|||.|...:|.|:||:||||::||.|:||:|||||.|||:|||||
Zfish   391 DLFQTLLPRHLEIIYEINRRHMERVASLYPGDMDRLRRMSLIEEGGQKRVNMAHLCIVGAHAVNG 455

  Fly   456 VAAIHSQILKDSLFHDFYEMEPQKFQNKTNGITPRRWLLLCNPGLSDLIAEKIGDEWPVHLDQLV 520
            ||.|||.|||.::|.|||||:|.|||||||||||||||::|||||:::||||||:::...||||.
Zfish   456 VARIHSDILKATVFKDFYEMDPHKFQNKTNGITPRRWLVMCNPGLAEVIAEKIGEDFIRDLDQLQ 520

  Fly   521 ALKKWAKDPNFQRNVARVKQENKLKLAAILEKDYGVKINPSSMFDIQVKRIHEYKRQLLNCLHII 585
            .|:.:..|..|.|::|:||||||||.|..||:.|.|||||:||||||||||||||||||||||||
Zfish   521 KLRDFVNDEAFIRDIAKVKQENKLKFAVHLEEHYKVKINPNSMFDIQVKRIHEYKRQLLNCLHII 585

  Fly   586 TLYNRIKKDPTANFTPRTIMIGGKAAPGYYVAKQIIKLICAVGNVVNNDPIVGDKLKVIFLENYR 650
            |.||||||:|...:|||||||||||||||:.||.||:||.|:|.||||||:|||:||||||||||
Zfish   586 TFYNRIKKEPNKQWTPRTIMIGGKAAPGYHTAKMIIRLITAIGEVVNNDPVVGDRLKVIFLENYR 650

  Fly   651 VTLAEKIMPAADLSEQISTAGTEASGTGNMKFQLNGALTIGTLDGANVEMAEEMGLDNIFIFGMT 715
            ||||||.:||||||||||||||||||||||||.|||||||||:||||||||||.|.:|.|||||.
Zfish   651 VTLAEKAIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR 715

  Fly   716 VDEVEALKKKGYNAYDYYNANPEVKQVIDQIQGGFFSPGNPNEFKNIADILLKYDHYYLLADYDA 780
            |::|||:..|||||.:|||..||:||.||||.||||||..|:.||:|.::|:.:|.:.:.|||:.
Zfish   716 VEDVEAMDVKGYNASEYYNRIPELKQAIDQIAGGFFSPKQPDLFKDIVNMLMHHDRFKVFADYED 780

  Fly   781 YIKAQDLVSKTYQNQAKWLEMSINNIASSGKFSSDRTIAEYAREIWGVEPTWEKLPAPED 840
            |||.|:.||..|:...:|.:..|.|||.||||||||||::|||||||||||.|||.||:|
Zfish   781 YIKCQEKVSALYKKPKEWTKKVILNIAGSGKFSSDRTISQYAREIWGVEPTLEKLAAPDD 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyPNP_001027219.1 GT1_Glycogen_Phosphorylase 29..828 CDD:99996 594/798 (74%)
P_ylase 32..828 CDD:273967 592/795 (74%)
pygmaNP_001018464.1 GT1_Glycogen_Phosphorylase 29..828 CDD:99996 594/798 (74%)
P_ylase 32..828 CDD:273967 592/795 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583558
Domainoid 1 1.000 1088 1.000 Domainoid score I21
eggNOG 1 0.900 - - E1_COG0058
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2145
Inparanoid 1 1.050 1294 1.000 Inparanoid score I157
OMA 1 1.010 - - QHG62832
OrthoDB 1 1.010 - - D108256at33208
OrthoFinder 1 1.000 - - FOG0000986
OrthoInspector 1 1.000 - - otm26449
orthoMCL 1 0.900 - - OOG6_100699
Panther 1 1.100 - - O PTHR11468
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2230
SonicParanoid 1 1.000 - - X645
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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