DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlyP and pygm

DIOPT Version :9

Sequence 1:NP_001027219.1 Gene:GlyP / 33386 FlyBaseID:FBgn0004507 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_001001904.1 Gene:pygm / 431680 XenbaseID:XB-GENE-955302 Length:843 Species:Xenopus tropicalis


Alignment Length:838 Identity:610/838 - (72%)
Similarity:728/838 - (86%) Gaps:0/838 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKPQSDADRRKQISVRGIAEVGNVTEVKKNFNRHLHYTLVKDRNVSTLRDYYFALANTVKDNMV 65
            |:.|.||:|::|||||||||.:|:|:||:|:||||||:||||||||||.||||||||:||:|::|
 Frog     1 MAAPLSDSDKKKQISVRGIAGLGDVSEVRKSFNRHLHFTLVKDRNVSTPRDYYFALAHTVRDHLV 65

  Fly    66 GRWIRTQQHYYEKDPKRVYYLSLEYYMGRSLTNTMINLGIQSECEEAMYQLGLDIENLEEMEEDA 130
            ||||||||:||||||||:||||||:||||:|.|||:|||:|..|:||:||||||:|.|||:||||
 Frog    66 GRWIRTQQYYYEKDPKRIYYLSLEFYMGRTLQNTMLNLGLQHACDEAIYQLGLDMEELEEIEEDA 130

  Fly   131 GLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFAQKIKNGEQVEEPDDWLRYGNPWEKARP 195
            |||||||||||||||||||||||||||||||||:|||.|:|.||.||||.|||||||||||||||
 Frog   131 GLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQRILNGWQVEEADDWLRYGNPWEKARP 195

  Fly   196 EFMLPVNFYGRVIDTPEGKKWVDTQRVFAMPYDNPIPGYNNNHVNTLRLWSAKSPIDFNLKFFND 260
            ||||||:|:|||..|.||.||||||.|.|||||.|:|||.||.|||:||||||:|.:|||:.||.
 Frog   196 EFMLPVHFFGRVEHTAEGAKWVDTQIVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNEFNLQEFNV 260

  Fly   261 GDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFMCAATLQDIIRRYKASKFGSREAVRN 325
            ||||:||||||||||||||||||||||||||||||||||:.||||||||||:|:||||.|:.||.
 Frog   261 GDYIEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 325

  Fly   326 TFDHFPDKVAIQLNDTHPSLAIPELMRILVDEEHLTWEKAWDITVRSCAYTNHTVLPEALERWPV 390
            .||.||||||||||||||:||||||||||||.|.:.|::||::|.::||||||||||||||||||
 Frog   326 CFDTFPDKVAIQLNDTHPALAIPELMRILVDVEKMEWDRAWEVTKKTCAYTNHTVLPEALERWPV 390

  Fly   391 SLLESILPRHLQIIYHINFLHMENVKKKFPDDLDRMRRMSMVEEDGEKRINMAHLSIVGSHAVNG 455
            .|.|.:|||||:|||.||..|::.|...:|.|:||:||||::||...||||||:|.::|||||||
 Frog   391 HLFEKLLPRHLEIIYAINQKHLDEVATMYPGDVDRLRRMSVIEEGDCKRINMANLCVIGSHAVNG 455

  Fly   456 VAAIHSQILKDSLFHDFYEMEPQKFQNKTNGITPRRWLLLCNPGLSDLIAEKIGDEWPVHLDQLV 520
            ||.|||:|:|:|:|.|||::||.|||||||||||||||:||||||||:||||||:::...|.||.
 Frog   456 VARIHSEIVKNSVFKDFYDLEPNKFQNKTNGITPRRWLMLCNPGLSDIIAEKIGEDFVTDLSQLR 520

  Fly   521 ALKKWAKDPNFQRNVARVKQENKLKLAAILEKDYGVKINPSSMFDIQVKRIHEYKRQLLNCLHII 585
            .|..:..|.:|..:||:||||||||.||.||::|.|||||||:||:|||||||||||||||||||
 Frog   521 KLLDFVNDESFVHDVAKVKQENKLKFAAYLEQEYKVKINPSSVFDVQVKRIHEYKRQLLNCLHII 585

  Fly   586 TLYNRIKKDPTANFTPRTIMIGGKAAPGYYVAKQIIKLICAVGNVVNNDPIVGDKLKVIFLENYR 650
            ||||||||||:..|.|||:||||||||||::||.|||||.::.::|||||::||:||||||||||
 Frog   586 TLYNRIKKDPSKIFVPRTVMIGGKAAPGYHMAKMIIKLINSIASIVNNDPVIGDRLKVIFLENYR 650

  Fly   651 VTLAEKIMPAADLSEQISTAGTEASGTGNMKFQLNGALTIGTLDGANVEMAEEMGLDNIFIFGMT 715
            |:||||::||||||:|||||||||||||||||.|||||||||:||||||||||.|.:|:|||||.
 Frog   651 VSLAEKVIPAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMR 715

  Fly   716 VDEVEALKKKGYNAYDYYNANPEVKQVIDQIQGGFFSPGNPNEFKNIADILLKYDHYYLLADYDA 780
            ||:||||.||||:|..||:..||::||||||:.|.|||..|:.||::.::|:.:|.:.:.|||:.
 Frog   716 VDDVEALDKKGYSAKAYYDRIPELRQVIDQIRDGHFSPREPDLFKDVVNMLMNHDRFKVFADYED 780

  Fly   781 YIKAQDLVSKTYQNQAKWLEMSINNIASSGKFSSDRTIAEYAREIWGVEPTWEKLPAP 838
            |||.|:.|.:.|.|..:|.:..|.|||.||||||||||:|||.|||||||:..|:|.|
 Frog   781 YIKCQEKVDQLYMNPREWTKKVIRNIACSGKFSSDRTISEYATEIWGVEPSAVKIPPP 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyPNP_001027219.1 GT1_Glycogen_Phosphorylase 29..828 CDD:99996 585/798 (73%)
P_ylase 32..828 CDD:273967 584/795 (73%)
pygmNP_001001904.1 GT35_Glycogen_Phosphorylase 29..828 CDD:340853 585/798 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 1088 1.000 Domainoid score I24
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1282 1.000 Inparanoid score I167
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D108256at33208
OrthoFinder 1 1.000 - - FOG0000986
OrthoInspector 1 1.000 - - otm49182
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X645
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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