DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlyP and pygmb

DIOPT Version :9

Sequence 1:NP_001027219.1 Gene:GlyP / 33386 FlyBaseID:FBgn0004507 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_001314960.1 Gene:pygmb / 393444 ZFINID:ZDB-GENE-040426-1206 Length:842 Species:Danio rerio


Alignment Length:840 Identity:609/840 - (72%)
Similarity:727/840 - (86%) Gaps:0/840 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKPQSDADRRKQISVRGIAEVGNVTEVKKNFNRHLHYTLVKDRNVSTLRDYYFALANTVKDNMV 65
            ||||.:|.::||||||||:|.|.||.::|.|||||||:||||||||:|.||||||||:||:|::|
Zfish     1 MSKPLTDQEKRKQISVRGLAGVENVADLKTNFNRHLHFTLVKDRNVATKRDYYFALAHTVRDHLV 65

  Fly    66 GRWIRTQQHYYEKDPKRVYYLSLEYYMGRSLTNTMINLGIQSECEEAMYQLGLDIENLEEMEEDA 130
            ||||||||||||||||||||||||:||||:|.|||:||.:::.|:||:||||||:|.|:::||||
Zfish    66 GRWIRTQQHYYEKDPKRVYYLSLEFYMGRTLQNTMVNLALENACDEAIYQLGLDMEELQDIEEDA 130

  Fly   131 GLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFAQKIKNGEQVEEPDDWLRYGNPWEKARP 195
            |||||||||||||||||||||||||||||||||:|||.|||..|.||||.|||||||||||||||
Zfish   131 GLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVKGWQVEEADDWLRYGNPWEKARP 195

  Fly   196 EFMLPVNFYGRVIDTPEGKKWVDTQRVFAMPYDNPIPGYNNNHVNTLRLWSAKSPIDFNLKFFND 260
            |:|.||:|||||...|:|.||||||.|.|:|||.|:|||.||.|||:||||||:|.:|:||.||.
Zfish   196 EYMRPVHFYGRVEHHPDGVKWVDTQVVLALPYDTPVPGYRNNIVNTMRLWSAKAPCEFHLKDFNV 260

  Fly   261 GDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFMCAATLQDIIRRYKASKFGSREAVRN 325
            |.|||||||:|||||||||||||||||||||||||||||:.||||||||||:|||||||.|.||.
Zfish   261 GGYIQAVLDKNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTEIVRM 325

  Fly   326 TFDHFPDKVAIQLNDTHPSLAIPELMRILVDEEHLTWEKAWDITVRSCAYTNHTVLPEALERWPV 390
            .....|||||||||||||::|||||||||||:|.|||:.|||||||:||||||||||||||||||
Zfish   326 DLSTLPDKVAIQLNDTHPAMAIPELMRILVDDEKLTWDVAWDITVRTCAYTNHTVLPEALERWPV 390

  Fly   391 SLLESILPRHLQIIYHINFLHMENVKKKFPDDLDRMRRMSMVEEDGEKRINMAHLSIVGSHAVNG 455
            .|.:::|||||:|||.||..|||.:...:|.|.||:||||::||.|:|:||||||.|||||||||
Zfish   391 DLFQNLLPRHLEIIYEINRRHMERISALYPGDFDRLRRMSLIEEGGQKKINMAHLCIVGSHAVNG 455

  Fly   456 VAAIHSQILKDSLFHDFYEMEPQKFQNKTNGITPRRWLLLCNPGLSDLIAEKIGDEWPVHLDQLV 520
            ||.|||.|:||::|.|||:::|||||||||||||||||::|||||:::|||:||:::...|.||.
Zfish   456 VAQIHSDIIKDTVFKDFYDVDPQKFQNKTNGITPRRWLVMCNPGLAEVIAERIGEDYIRDLSQLK 520

  Fly   521 ALKKWAKDPNFQRNVARVKQENKLKLAAILEKDYGVKINPSSMFDIQVKRIHEYKRQLLNCLHII 585
            .|.|:..|....|::|:||||||:|.|..||:.|.|||||:||||:.||||||||||||||||||
Zfish   521 KLLKFVDDDALIRDIAKVKQENKMKFAVHLEEQYKVKINPNSMFDVHVKRIHEYKRQLLNCLHII 585

  Fly   586 TLYNRIKKDPTANFTPRTIMIGGKAAPGYYVAKQIIKLICAVGNVVNNDPIVGDKLKVIFLENYR 650
            ||||||||:|...:|||||||||||||||:.||.|||||.::|:|||||.:|||:||||||||||
Zfish   586 TLYNRIKKEPNKAWTPRTIMIGGKAAPGYHTAKMIIKLITSIGDVVNNDIVVGDRLKVIFLENYR 650

  Fly   651 VTLAEKIMPAADLSEQISTAGTEASGTGNMKFQLNGALTIGTLDGANVEMAEEMGLDNIFIFGMT 715
            ||||||::||||||||||||||||||||||||.|||||||||:||||||||||.|.:|:|||||.
Zfish   651 VTLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMR 715

  Fly   716 VDEVEALKKKGYNAYDYYNANPEVKQVIDQIQGGFFSPGNPNEFKNIADILLKYDHYYLLADYDA 780
            |.:|||:.||||:|.:|||..||:||.:|||.||:|||.:|::||:|.::|:.:|.:.:.|||:.
Zfish   716 VKDVEAMDKKGYDAMEYYNRIPELKQAMDQISGGYFSPADPDQFKDIVNMLMHHDRFKVFADYED 780

  Fly   781 YIKAQDLVSKTYQNQAKWLEMSINNIASSGKFSSDRTIAEYAREIWGVEPTWEKLPAPED 840
            ||:.||.||..|:|..:|.:|.|:|||..|||||||||::|||||||:||:.||:.||:|
Zfish   781 YIQCQDKVSALYKNTKEWTKMVIHNIAGCGKFSSDRTISQYAREIWGMEPSLEKIAAPDD 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyPNP_001027219.1 GT1_Glycogen_Phosphorylase 29..828 CDD:99996 584/798 (73%)
P_ylase 32..828 CDD:273967 582/795 (73%)
pygmbNP_001314960.1 GT1_Glycogen_Phosphorylase 29..827 CDD:99996 583/797 (73%)
P_ylase 32..827 CDD:273967 581/794 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583561
Domainoid 1 1.000 1088 1.000 Domainoid score I21
eggNOG 1 0.900 - - E1_COG0058
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1294 1.000 Inparanoid score I157
OMA 1 1.010 - - QHG62832
OrthoDB 1 1.010 - - D108256at33208
OrthoFinder 1 1.000 - - FOG0000986
OrthoInspector 1 1.000 - - otm26449
orthoMCL 1 0.900 - - OOG6_100699
Panther 1 1.100 - - LDO PTHR11468
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2230
SonicParanoid 1 1.000 - - X645
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.