DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4259 and CG18735

DIOPT Version :9

Sequence 1:NP_001259904.1 Gene:CG4259 / 33385 FlyBaseID:FBgn0031389 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster


Alignment Length:236 Identity:59/236 - (25%)
Similarity:97/236 - (41%) Gaps:26/236 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 FPWVVSVLDQRDWLFRYIGVGSLINPNVVLTAAHILNGTTKYDLVVRAGEWDTSTTADQQH---V 100
            :||::.::    |...:....||:|....|||||.:||.....:.||..|.:    ....|   |
  Fly    94 YPWMIMLM----WFGNFYCGASLVNDQYALTAAHCVNGFYHRLITVRLLEHN----RQDSHVKIV 150

  Fly   101 DLEVLNIVSHEQFNRFNAENNMALLILVSAFEMTANINLIPLYLQEAGIQKGSCFFNGWGKVYLN 165
            |..|..::.|.:::..|.::::||:.......:..:::.:.:..........:....|||.:   
  Fly   151 DRRVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGIDMHPVCMPTPSENYAGQTAVVTGWGAL--- 212

  Fly   166 STDYP--TVLKTVQVDLLSMGMC-----SSRKLPIQQICGKGLE--GID-CSGDGGAPLVCRILT 220
            |...|  ..|:.|:|.:||...|     ...|:....||...:|  |.| |.||.|.|:  .:|.
  Fly   213 SEGGPISDTLQEVEVPILSQEECRNSNYGESKITDNMICAGYVEQGGKDSCQGDSGGPM--HVLG 275

  Fly   221 YPYKYAQVGIVNWLSQKPVENTFIVFTNVAGLLPWIDYHLR 261
            ....|...|||:|.......|...|:|.|.....||..:.|
  Fly   276 SGDAYQLAGIVSWGEGCAKPNAPGVYTRVGSFNDWIAENTR 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4259NP_001259904.1 Tryp_SPc 39..259 CDD:238113 58/232 (25%)
Tryp_SPc 39..256 CDD:214473 56/229 (24%)
CG18735NP_652645.1 Tryp_SPc 82..311 CDD:214473 56/229 (24%)
Tryp_SPc 83..314 CDD:238113 58/232 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457637
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.