DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4259 and LOC548809

DIOPT Version :9

Sequence 1:NP_001259904.1 Gene:CG4259 / 33385 FlyBaseID:FBgn0031389 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001016055.2 Gene:LOC548809 / 548809 -ID:- Length:334 Species:Xenopus tropicalis


Alignment Length:244 Identity:65/244 - (26%)
Similarity:99/244 - (40%) Gaps:43/244 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 FPWVVSVLDQRDWLFRYIGV----GSLINPNVVLTAAHILN-GTTKYDLVVRAGEWDTSTTADQQ 98
            :||.:|:        ||.|.    ||:|:...::||||... ..|..|..|..|.:..|..:..:
 Frog    69 WPWQISL--------RYKGSHICGGSVISNQWIMTAAHCFEYSRTPSDYQVLLGAYQLSVASASE 125

  Fly    99 HVDLEVLNIVSHEQFNRFNAENNMALLILVSAFEMTANINLIPLYLQEAGIQKG-SCFFNGWGKV 162
            .:. .|..::.:..|.......::|||.|.|....|..|..:.:....:|..:| .|:..|||.:
 Frog   126 LLS-SVARVIVNPSFTIPGGPGDIALLKLTSPVAYTEYILPVCVPSSASGFYEGMQCWVTGWGNI 189

  Fly   163 YLNST-DYPTVLKTVQVDLLSMGMCSSRK------------LPIQQICGKGLEG--IDCSGDGGA 212
            ....| .||..|:.|...|:|...|:...            :|..|||.....|  ..|.||.|.
 Frog   190 GSAVTLPYPQTLQQVMTPLISWSTCNQMYHVQSGISSNIAIVPKDQICAGYAAGQKDSCQGDSGG 254

  Fly   213 PLVCRILTYPYKYAQVGIVNW-----LSQKPVENTFIVFTNVAGLLPWI 256
            ||||::....|   |:|||:|     .:.:|.     |:|.|.....|:
 Frog   255 PLVCQLQGVWY---QIGIVSWGDGCAQASRPG-----VYTLVPNFKSWL 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4259NP_001259904.1 Tryp_SPc 39..259 CDD:238113 65/244 (27%)
Tryp_SPc 39..256 CDD:214473 64/242 (26%)
LOC548809NP_001016055.2 Tryp_SPc 57..294 CDD:214473 64/241 (27%)
Tryp_SPc 58..297 CDD:238113 65/244 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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