DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4259 and Cela2a

DIOPT Version :9

Sequence 1:NP_001259904.1 Gene:CG4259 / 33385 FlyBaseID:FBgn0031389 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_036685.1 Gene:Cela2a / 24332 RGDID:2548 Length:271 Species:Rattus norvegicus


Alignment Length:277 Identity:77/277 - (27%)
Similarity:132/277 - (47%) Gaps:45/277 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LTTLIISLVNSQYFNY---NQIRRETYG--SNPRATFPWVVSV--LDQRDWLFRYIGVGSLINPN 65
            |:.|:...::..|..|   :.:.|...|  ::|. ::||.||:  |....|  .:...|||:..|
  Rat     7 LSALVAGALSCGYPTYEVQHDVSRVVGGQEASPN-SWPWQVSLQYLSSGKW--HHTCGGSLVANN 68

  Fly    66 VVLTAAHILNGTTKYDLVVRAGEWDTSTTADQQHVDLEVLNIVSHEQFN--RFNAENNMALLILV 128
            .||||||.::.:..|.:::  |....| |::...:.::|..:|.||::|  :.:..|::||:.|.
  Rat    69 WVLTAAHCISNSRTYRVLL--GRHSLS-TSESGSLAVQVSKLVVHEKWNAQKLSNGNDIALVKLA 130

  Fly   129 SAFEMTANINLIPLYLQEAGI---QKGSCFFNGWGKVYLNSTDYPTVLKTVQVDLLSMGMCSS-- 188
            |...:|:.|.  ...|..||.   ....|:..|||::..|... |.||:..::.::....|||  
  Rat   131 SPVALTSKIQ--TACLPPAGTILPNNYPCYVTGWGRLQTNGAT-PDVLQQGRLLVVDYATCSSAS 192

  Fly   189 ---RKLPIQQICGKGLEGI--DCSGDGGAPLVCRILTYPYKYAQV-GIVNWLS-------QKPVE 240
               ..:....:|..| :|:  .|:||.|.||.|:.....:   || |||::.|       :||  
  Rat   193 WWGSSVKTNMVCAGG-DGVTSSCNGDSGGPLNCQASNGQW---QVHGIVSFGSTLGCNYPRKP-- 251

  Fly   241 NTFIVFTNVAGLLPWID 257
               .|||.|:..:.||:
  Rat   252 ---SVFTRVSNYIDWIN 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4259NP_001259904.1 Tryp_SPc 39..259 CDD:238113 70/241 (29%)
Tryp_SPc 39..256 CDD:214473 68/238 (29%)
Cela2aNP_036685.1 Tryp_SPc 30..264 CDD:214473 71/251 (28%)
Tryp_SPc 31..267 CDD:238113 72/253 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.