DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4259 and tmprss9

DIOPT Version :9

Sequence 1:NP_001259904.1 Gene:CG4259 / 33385 FlyBaseID:FBgn0031389 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_002940084.3 Gene:tmprss9 / 100489279 XenbaseID:XB-GENE-993973 Length:1151 Species:Xenopus tropicalis


Alignment Length:263 Identity:68/263 - (25%)
Similarity:113/263 - (42%) Gaps:44/263 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YNQIRRETYGSNP---------------RATFPWVVSVLDQRDWLFRYIGVGSLINPNVVLTAAH 72
            ::.|:.:..||.|               |...||..|:.:..    |:....::|....:::|||
 Frog   527 FSTIKPQECGSRPGLTKPNKIVGGLDAVRGEIPWQASLKEGS----RHFCGATIIGDRWLVSAAH 587

  Fly    73 ILNGTTKYDLVVRAGEWDTSTTADQQHVDLEVLNIVSHEQFNRFNAENNMALLILVSAFEMTANI 137
            ..| .||.|.|.........:.||...:.:.:..::.|..||....:.::|:|.|.|:  :|.|.
 Frog   588 CFN-QTKVDQVTAHMGSTALSGADTIAIKISLKRVIQHPHFNPLTLDFDVAVLELASS--LTFNK 649

  Fly   138 NLIPLYLQEAGIQK----GSCFFNGWGKVYLNSTDYPTVLKTVQVDLLSMGMCS---SRKLPIQQ 195
            .:.|:.|..| :||    ..|..:|||.:...:...|.||:...|.::...:||   :..:..:.
 Frog   650 YVQPVCLPSA-LQKFPAGWKCMISGWGNIKEGNVSKPEVLQKASVGIIDQKICSVLYNFSITERM 713

  Fly   196 ICGKGLEG-ID-CSGDGGAPLVCRILTYPYKYAQVGIVNW-----LSQKPVENTFIVFTNVAGLL 253
            ||...|:| :| |.||.|.||.|.  ..|..:...|||:|     .::||.     |::.|..|.
 Frog   714 ICAGFLDGKVDSCQGDSGGPLACE--ESPGIFFLAGIVSWGIGCAQAKKPG-----VYSRVTKLK 771

  Fly   254 PWI 256
            .||
 Frog   772 DWI 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4259NP_001259904.1 Tryp_SPc 39..259 CDD:238113 63/232 (27%)
Tryp_SPc 39..256 CDD:214473 61/230 (27%)
tmprss9XP_002940084.3 SEA 60..156 CDD:396113
LDLa 186..221 CDD:238060
Tryp_SPc 234..463 CDD:214473
Tryp_SPc 547..774 CDD:238113 62/241 (26%)
LDLa 871..906 CDD:238060
Tryp_SPc 919..1145 CDD:238113
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.