DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4259 and tmprss6

DIOPT Version :9

Sequence 1:NP_001259904.1 Gene:CG4259 / 33385 FlyBaseID:FBgn0031389 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:240 Identity:60/240 - (25%)
Similarity:114/240 - (47%) Gaps:40/240 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 FPWVVSVLDQRDWLFRYIGVGSLINPNVVLTAAHILNGT--------TKYDLVVRAGEWDTSTTA 95
            :||..|:..:.:    :|..|:|:....:|||||.....        |.|...||.      :.:
 Frog   582 WPWQASLQVRGE----HICGGTLVADQWILTAAHCFTPESYASPEVWTVYLGKVRL------SRS 636

  Fly    96 DQQHVDLEVLNIVSHEQFNRFNAENNMALLILVSAFEMTANINLIPLYLQEA------GIQKGSC 154
            .|:.:..:|:.:|.|..::..:.:.::||::|.....:|:. ::.|:.|..:      |   .||
 Frog   637 TQKELAFKVIRLVIHPFYDEDSHDYDVALVLLDHLVPLTSP-HVQPICLPSSTHHFPTG---SSC 697

  Fly   155 FFNGWGKVYLNSTDYPT--VLKTVQVDLLSMGMCSS---RKLPIQQICGKGLEGID--CSGDGGA 212
            :..|||.|..|.   ||  ||:.|.:.|::..:|:.   .::..:.:|....:|..  |.||.|:
 Frog   698 WVTGWGSVKENG---PTSDVLQKVDIQLVAQDICTELYRYQISPRMLCAGYRDGSKDACQGDSGS 759

  Fly   213 PLVCRILTYPYKYAQVGIVNWLSQKPVENTFIVFTNVAGLLPWID 257
            ||||:  |...::.|.|:|:|.:...:...|.|::.:..|:.||:
 Frog   760 PLVCK--TASGRWFQAGLVSWGAGCGIPRYFGVYSRITRLVQWIE 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4259NP_001259904.1 Tryp_SPc 39..259 CDD:238113 60/240 (25%)
Tryp_SPc 39..256 CDD:214473 58/237 (24%)
tmprss6XP_004913946.2 SEA 77..176 CDD:396113
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060
LDLa 480..514 CDD:238060
LDLa 525..560 CDD:238060
Tryp_SPc 572..804 CDD:238113 60/240 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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