DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or22c and Or59a

DIOPT Version :9

Sequence 1:NP_523454.2 Gene:Or22c / 33381 FlyBaseID:FBgn0026396 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_523821.1 Gene:Or59a / 37711 FlyBaseID:FBgn0026384 Length:379 Species:Drosophila melanogaster


Alignment Length:395 Identity:72/395 - (18%)
Similarity:138/395 - (34%) Gaps:97/395 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VFAFAMVVVGAVGEVSYGCVHL------------DNLVVALEAFCPGTTKAVCVLKLWVFFRSNR 98
            ::.|..:|...:..:.|. |||            |.|.:...|.|     ..|.:|..::..:.:
  Fly    35 LYVFYSIVSNLLVTLCYP-VHLGISLFRNRTITEDILNLTTFATC-----TACSVKCLLYAYNIK 93

  Fly    99 RWAELVQRLRAILWESRRQEAQRMLVGLATTANRLSLLLLSSGTATNAAFTLQPLIMGLYRWIVQ 163
            ...|: :||..:|.|......||.:.|......|            |..:    :.:|:|     
  Fly    94 DVLEM-ERLLRLLDERVVGPEQRSIYGQVRVQLR------------NVLY----VFIGIY----- 136

  Fly   164 LPGQ--TELPFNIILPSFAVQPGVFPLTYVLLTASGACTVFAFSFVDGFFICSCLYICG-AFRLV 225
            :|..  .||.|........:.|..||..::..|.:             ::|.:...|.| :|:|:
  Fly   137 MPCALFAELSFLFKEERGLMYPAWFPFDWLHSTRN-------------YYIANAYQIVGISFQLL 188

  Fly   226 QQDIRRIFADL-------HGDSVDVFTEEMN----AEVRHRLAQVVERHNAIIDFCTDLTRQFTV 279
            |..:...|..:       |...:....||:.    .:....|...:..|..|::....:....::
  Fly   189 QNYVSDCFPAVVLCLISSHIKMLYNRFEEVGLDPARDAEKDLEACITDHKHILELFRRIEAFISL 253

  Fly   280 IVLMHFLSAAFVLCSTILDIMLNTSS-LSGLTYICYIIAALTQLFLYCFGGNHVSESSAAVADVL 343
            .:|:.|...|..:|..:..::...|. ::.:.:|.|.:|...|:|..||.|.             
  Fly   254 PMLIQFTVTALNVCIGLAALVFFVSEPMARMYFIFYSLAMPLQIFPSCFFGT------------- 305

  Fly   344 YDMEW---------YKCDART------RKVILMILRRSQRAKTIAVPFFTPSLPALRSILSTAGS 393
             |.|:         :.|:..|      ||::|.:.:..:::..:|.......|....|.|..|.|
  Fly   306 -DNEYWFGRLHYAAFSCNWHTQNRSFKRKMMLFVEQSLKKSTAVAGGMMRIHLDTFFSTLKGAYS 369

  Fly   394 YITLL 398
            ..|::
  Fly   370 LFTII 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or22cNP_523454.2 7tm_6 69..392 CDD:251636 62/352 (18%)
Or59aNP_523821.1 7tm_6 64..368 CDD:251636 63/357 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465095
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.