DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or22c and Or43b

DIOPT Version :9

Sequence 1:NP_523454.2 Gene:Or22c / 33381 FlyBaseID:FBgn0026396 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster


Alignment Length:387 Identity:77/387 - (19%)
Similarity:153/387 - (39%) Gaps:93/387 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GGGGRPWHAHLLFVFAFAMVVVGAVGEVSYGCVH---------LDNLVVALEAFCPGTTKAVCVL 88
            |.|.:.|.   :|.|.:.||::.....::| .:|         |.:|.:.|..:|       ..|
  Fly    42 GIGRKIWR---VFSFTYNMVILPVSFPINY-VIHLAEFPPELLLQSLQLCLNTWC-------FAL 95

  Fly    89 KLWVFF-------RSNRRWAELVQRLRAILWESRRQEAQRMLVGLATTANRLSLLLLSSGTATNA 146
            |.:...       .:|:.:.||.:       ...:...:|.:..:..|..||.|..:    ....
  Fly    96 KFFTLIVYTHRLELANKHFDELDK-------YCVKPAEKRKVRDMVATITRLYLTFV----VVYV 149

  Fly   147 AFTLQPLIMGLYRWIVQLPGQTELPF--------NIILPSFAVQPGVFPLTYVLLTASGACTVFA 203
            .:....|:.||...  ::|..|..||        .:.:.||.   ..|.:.|.:..|:.      
  Fly   150 LYATSTLLDGLLHH--RVPYNTYYPFINWRVDRTQMYIQSFL---EYFTVGYAIYVATA------ 203

  Fly   204 FSFVDGFFICSCLYICGAFR---LVQQDIRRIFADLHGDSVDVFTEEMNAEVRH---RLAQVVER 262
               .|.:.:   :|: .|.|   |:.:| |.|:.   ||.    :.|.:::..:   .|...::.
  Fly   204 ---TDSYPV---IYV-AALRTHILLLKD-RIIYL---GDP----SNEGSSDPSYMFKSLVDCIKA 253

  Fly   263 HNAIIDFCTDLTRQFTVIVLMHFLSAAFVLCSTILDIML-------NTSSLSGLTYICYIIAALT 320
            |..:::||..:..     ::...:.|.|::|.:||.|::       :.|:..|:  :.|::|.|.
  Fly   254 HRTMLNFCDAIQP-----IISGTIFAQFIICGSILGIIMINMVLFADQSTRFGI--VIYVMAVLL 311

  Fly   321 QLFLYCFGGNHVSESSAAVADVLYDMEWYKCDARTRKVILMILRRSQRAKTI-AVPFFTPSL 381
            |.|..||..|.:.:....:|..|:...|:..|.|.::.::..|::.|:..|. |:..|..:|
  Fly   312 QTFPLCFYCNAIVDDCKELAHALFHSAWWVQDKRYQRTVIQFLQKLQQPMTFTAMNIFNINL 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or22cNP_523454.2 7tm_6 69..392 CDD:251636 67/342 (20%)
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 64/323 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465104
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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