DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or22c and Or24a

DIOPT Version :9

Sequence 1:NP_523454.2 Gene:Or22c / 33381 FlyBaseID:FBgn0026396 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster


Alignment Length:402 Identity:113/402 - (28%)
Similarity:211/402 - (52%) Gaps:29/402 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HFYRIPRISGLIVGLWPQRIRGGGGRPWHAHLLFVFAFAMVVVGAVGEVSYGCVHLD-NLVVALE 75
            |::.:|:.:..::|.:|::.|....:.|.     .|.|.::..|...|..||..::. |:..||:
  Fly    15 HYFMVPKFALSLIGFYPEQKRTVLVKLWS-----FFNFFILTYGCYAEAYYGIHYIPINIATALD 74

  Fly    76 AFCPGTTKAVCVLKLWVFFRSNRRWAELVQRLRAILWESRRQEAQRML---VGLATTANRLSLLL 137
            |.||..:..:.::|:...:........|::|:|.:   :.:|:::|.|   ....|.|.:|:.||
  Fly    75 ALCPVASSILSLVKMVAIWWYQDELRSLIERVRFL---TEQQKSKRKLGYKKRFYTLATQLTFLL 136

  Fly   138 LSSGTATNAAFTLQPLIMGLYR------WIVQLPGQTELPFNIILPSFAVQPGVFPLTYVLLTAS 196
            |..|..|:.:::::.||..:.|      ||.      |.||.::.|...::..::|:||:|:...
  Fly   137 LCCGFCTSTSYSVRHLIDNILRRTHGKDWIY------ETPFKMMFPDLLLRLPLYPITYILVHWH 195

  Fly   197 GACTVFAFSFVDGFFICSCLYICGAFRLVQQDIRRIFADLHGDSVDVF-TEEMNAEVRHRLAQVV 260
            |..||..|...||||:..|||.......:|.|:..:   |..::::.. :|...|.:...:.::|
  Fly   196 GYITVVCFVGADGFFLGFCLYFTVLLLCLQDDVCDL---LEVENIEKSPSEAEEARIVREMEKLV 257

  Fly   261 ERHNAIIDFCTDLTRQFTVIVLMHFLSAAFVLCSTILDIMLNTSSLSGLTYICYIIAALTQLFLY 325
            :|||.:.:....|:.....|.|.||::::.::.::::||:| .|.|..:.|:.|..|...::|||
  Fly   258 DRHNEVAELTERLSGVMVEITLAHFVTSSLIIGTSVVDILL-FSGLGIIVYVVYTCAVGVEIFLY 321

  Fly   326 CFGGNHVSESSAAVADVLYDMEWYKCDARTRKVILMILRRSQRAKTIAVPFFTPSLPALRSILST 390
            |.||:|:.|:.:.:|...:...||....|.:|:.|:::.|:||..||.:|||:|||..|.|||..
  Fly   322 CLGGSHIMEACSNLARSTFSSHWYGHSVRVQKMTLLMVARAQRVLTIKIPFFSPSLETLTSILRF 386

  Fly   391 AGSYITLLKTFL 402
            .||.|.|.|:.:
  Fly   387 TGSLIALAKSVI 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or22cNP_523454.2 7tm_6 69..392 CDD:251636 96/332 (29%)
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 96/332 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435208
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C172
Homologene 1 1.000 - - H119597
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26277
OrthoDB 1 1.010 - - D344326at33208
OrthoFinder 1 1.000 - - FOG0014265
OrthoInspector 1 1.000 - - mtm9641
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.860

Return to query results.
Submit another query.