DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or22c and Or13a

DIOPT Version :9

Sequence 1:NP_523454.2 Gene:Or22c / 33381 FlyBaseID:FBgn0026396 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster


Alignment Length:425 Identity:113/425 - (26%)
Similarity:188/425 - (44%) Gaps:88/425 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GLWPQRIRGGGGRPWHAHLLFVFAF---AMVVVGAVG-EVSYGCV----HLDNLVVALEAFCPGT 81
            |.||..   ...|||.:..|...|:   |..|:.:|| .:||...    :|.::::..|..|...
  Fly    23 GSWPLT---ESSRPWRSQSLLATAYIVWAWYVIASVGITISYQTAFLLNNLSDIIITTENCCTTF 84

  Fly    82 TKAVCVLKLWVFFRSN-RRWAELVQRLRAILW---ESRRQ---EAQRMLVGLATTANRLSLLLLS 139
            ...:..::| :..|.| |::.:|::.....:|   .|:..   |.:|.:|..:...:.|:.|:: 
  Fly    85 MGVLNFVRL-IHLRLNQRKFRQLIENFSYEIWIPNSSKNNVAAECRRRMVTFSIMTSLLACLII- 147

  Fly   140 SGTATNAAFTLQPLIMGLYRWIVQLPGQTELPFNIILPSFAVQPGVFP----------------- 187
                   .:.:.||:              |:.|.   |:|..|...||                 
  Fly   148 -------MYCVLPLV--------------EIFFG---PAFDAQNKPFPYKMIFPYDAQSSWIRYV 188

  Fly   188 LTYVLLTASGAC---TVFAFSFVDGFFICSCLYICGAFRLVQQDIRRIFADLHGDSVDVFTEEMN 249
            :||:..:.:|.|   |:||...:.||||   .|.||.|.|:.|.|..:||   |.:.:: .|.:.
  Fly   189 MTYIFTSYAGICVVTTLFAEDTILGFFI---TYTCGQFHLLHQRIAGLFA---GSNAEL-AESIQ 246

  Fly   250 AEVRHRLAQVVERHNAIIDFCTDLTRQFTVIVLMHFLSAAFVLCSTILDIMLNTSSLSG--LTYI 312
            .|   ||.::||:||.||.|...|...|..|:|.:.:.::.::|.....|:...:...|  :.:|
  Fly   247 LE---RLKRIVEKHNNIISFAKRLEDFFNPILLANLMISSVLICMVGFQIVTGKNMFIGDYVKFI 308

  Fly   313 CYIIAALTQLFLYCFGGNHVSESSAAVADVLYDMEWYKCD-----------ARTRKVI-LMILRR 365
            .||.:||:||::.|..|:.:.:.|...|.:||:.:|...|           .|.|..| .|||..
  Fly   309 IYISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCS 373

  Fly   366 SQRAKTIAVPFFTPSLPALRSILSTAGSYITLLKT 400
            .|..:..|..|.|.||.:..:||||:.||.|||::
  Fly   374 QQPVRITAFKFSTLSLQSFTAILSTSISYFTLLRS 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or22cNP_523454.2 7tm_6 69..392 CDD:251636 93/363 (26%)
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 92/356 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465317
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.