DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or22c and Or1a

DIOPT Version :10

Sequence 1:NP_523454.2 Gene:Or22c / 33381 FlyBaseID:FBgn0026396 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:424 Identity:94/424 - (22%)
Similarity:161/424 - (37%) Gaps:104/424 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LWPQRI---RGG-------GGRPWHAHLLFVF-----AFAMVVVGAVGEVSYGCVHLDNLVVALE 75
            ||.||.   |.|       .|....:.||:..     :|.:..|.|     :...:.:.:|:..|
  Fly    12 LWTQRFTFARMGLDLQPDKKGNVLRSPLLYCIMCLTTSFELCTVCA-----FMVQNRNQIVLCSE 71

  Fly    76 AFCPGTTKAVCVLKLWVFFRSNRRWAELVQRLRAIL---------WESRRQEAQRMLVGLATTAN 131
            |...|......:||:.:|...:....:|:|::::..         |.|:.|..|.|..       
  Fly    72 ALMHGLQMVSSLLKMAIFLAKSHDLVDLIQQIQSPFTEEDLVGTEWRSQNQRGQLMAA------- 129

  Fly   132 RLSLLLLSSGTATNAAFTLQPLIMGLYRWIVQLPGQTELPFNIILPSFAVQPGVFPLTYVLLTAS 196
              ...::.:|  |:.:|.|.|:.:.:.::...........|.::||....||.|:.:...|:.  
  Fly   130 --IYFMMCAG--TSVSFLLMPVALTMLKYHSTGEFAPVSSFRVLLPYDVTQPHVYAMDCCLMV-- 188

  Fly   197 GACTVFAFSFVDGFFICS-----------CLYICGAFRLVQQDIRRIFADLHGDSVD-----VFT 245
                     ||..||.||           .|.:...:|.:.|.::||.:..:....|     :|.
  Fly   189 ---------FVLSFFCCSTTGVDTLYGWCALGVSLQYRRLGQQLKRIPSCFNPSRSDFGLSGIFV 244

  Fly   246 EEMNAEVRHRLAQVVERHNAIIDFCTDLTRQFTVIVLMHFLSAAFV--------LCSTILD-IML 301
            |..      ||.::|:..|                  ..|:..|||        .||.|.. ||.
  Fly   245 EHA------RLLKIVQHFN------------------YSFMEIAFVEVVIICGLYCSVICQYIMP 285

  Fly   302 NTS-SLSGLTYICYIIAALTQLFLYCFGGNHVSESSAAVADVLYD-MEWYKCDARTRKVILMILR 364
            :|: :.:.|.:...::.  |||.:|.||...|...:...:.:||: :.|.....:.||:.|..:.
  Fly   286 HTNQNFAFLGFFSLVVT--TQLCIYLFGAEQVRLEAERFSRLLYEVIPWQNLPPKHRKLFLFPIE 348

  Fly   365 RSQRAKTIAVPFFTPSLPALRSILSTAGSYITLL 398
            |:||...:...||....|.|..|..||||:.||:
  Fly   349 RAQRETVLGAYFFELGRPLLVWIFRTAGSFTTLM 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or22cNP_523454.2 7tm_6 69..392 CDD:251636 77/358 (22%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 73/344 (21%)

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