DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and HUL4

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_012570.3 Gene:HUL4 / 853494 SGDID:S000003797 Length:892 Species:Saccharomyces cerevisiae


Alignment Length:650 Identity:155/650 - (23%)
Similarity:261/650 - (40%) Gaps:178/650 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 PVS-QSTDPQLQ--TQPADDEPLPAGWEIRLDQYGRRYYVDHNTRST--YWEKPTPLPPGWEIRK 405
            |:| ||.|.|..  |.|.:::     .:.:..||...:::....:.|  |:...|        |:
Yeast   369 PISAQSNDKQGSGFTHPVNNK-----MKFKFFQYEEDWHIHSAAKLTFIYYVANT--------RR 420

  Fly   406 DGRGRVY----------YVDHNTRKTTWQRPNSERLMHFQHWQGQRAHVVSQGNQRYLYSQQQQQ 460
            :|||.:.          ::|:.              ..|.||:|                     
Yeast   421 NGRGALSIQSFYNITLDFIDYK--------------QDFDHWRG--------------------- 450

  Fly   461 PTAVTAQVTQDDEDALGPLPDGW----EKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEVSLINEG 521
                .||.|:     :..|.:.|    .||..|..:..|:            .:.|.::|::.  
Yeast   451 ----VAQKTK-----MNQLIEEWGNSTTKKCFSFCKYPFI------------LSLGIKISIME-- 492

  Fly   522 PLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRPGAPKGAKGVYGVPRAYERSFRWKLSQFRYLCQ 586
                 :|||.       .::|..                          |::|...|.      :
Yeast   493 -----YEIRR-------IMEHEA--------------------------EQAFLISLD------K 513

  Fly   587 SNALPSHIKITVTRQTLFEDSYHQIMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEVL 651
            ..::..:.||.|.|..:..||...|..... :|.:.|.|.|..|.|:|.||:.:||||||:..:.
Yeast   514 GKSVDVYFKIKVRRDVISHDSLRCIKEHQG-DLLKSLRIEFVNEPGIDAGGLRKEWFFLLTKSLF 577

  Fly   652 NPMYCLFEYANKNNYS-LQINPASYVNP----DHLQYFKFIGRFIAMALYHGRFIYSGFTMPFYK 711
            |||..||.|..:::.| ..|:|.::...    ..|:.:...|..:.:|:::...:...|....||
Yeast   578 NPMNGLFIYIKESSRSWFAIDPPNFDKSKGKNSQLELYYLFGVVMGLAIFNSTILDLQFPKALYK 642

  Fly   712 RMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFSVDFE--------VLG------QII 762
            ::.::.|:.:|...:.||...:||  |..|..|...|..||:.||        :|.      :.:
Yeast   643 KLCSEPLSFEDYSELFPETSRNLI--KMLNYTEDNFEDVFSLTFETTYRNNNWILNDSKSSKEYV 705

  Fly   763 HHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEV-VPLEWLKYFDERELEL 826
            ..||.|||....:|:.||.|::....|:.:.:.||.|...|:.||..| .....:|.|:..|||.
Yeast   706 TVELCENGRNVPITQSNKHEFVMKWVEFYLEKSIEPQYNKFVSGFKRVFAECNSIKLFNSEELER 770

  Fly   827 ILCGMQD---VDVEDWQRNTIY-RHYNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVGG 887
            ::||.::   .|.:..:..|.| ..::.:|:.|.|||:.:...|...:.:||||||.:.|:|..|
Yeast   771 LVCGDEEQTKFDFKSLRSVTKYVGGFSDDSRAVCWFWEIIESWDYPLQKKLLQFVTASDRIPATG 835

  Fly   888 FA------ELMGSNGPQRFCIEKVGKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEGF 946
            .:      .|:||:....           ||.:|||||.:.|..|.|..:|..||.:||.|:||:
Yeast   836 ISTIPFKISLLGSHDSDD-----------LPLAHTCFNEICLWNYSSKKKLELKLLWAINESEGY 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736 4/33 (12%)
WW 397..426 CDD:278809 5/38 (13%)
WW 478..509 CDD:197736 6/34 (18%)
WW 522..554 CDD:197736 4/31 (13%)
HECTc 594..946 CDD:238033 114/381 (30%)
HECTc 620..946 CDD:214523 106/355 (30%)
HUL4NP_012570.3 HUL4 1..892 CDD:227354 155/649 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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