DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and UPL2

DIOPT Version :10

Sequence 1:NP_476753.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_177189.1 Gene:UPL2 / 843368 AraportID:AT1G70320 Length:3658 Species:Arabidopsis thaliana


Alignment Length:405 Identity:163/405 - (40%)
Similarity:236/405 - (58%) Gaps:28/405 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   567 PRAYERSFRWKLSQFRYLCQSNA---------------LPSHIKITVTRQTLFEDSYHQI-MRLP 615
            |...|:||...|...|.:...|.               :...::|:|.|..:.||||:|: ||.|
plant  3254 PSLLEKSFSMMLKAPRLIDFDNKKAYFRSRIRHQHDQHISGPLRISVRRAYVLEDSYNQLRMRSP 3318

  Fly   616 AYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDH 680
             .:|:.||.:.|:||||:|.||::|||:.|||..:.:....||.... |:.:.|.||.|....:|
plant  3319 -QDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVG-NDATFQPNPNSVYQTEH 3381

  Fly   681 LQYFKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDEC 745
            |.||||:||.:|.||:.|:.:...||..|||.:|..|:|..|||.:||::|.:|.|:.:|::.:.
plant  3382 LSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWLLENDVSDI 3446

  Fly   746 GLELWFSVDFEVLGQIIH-------HELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTF 803
             |:|.||:|.:....|::       :|||..|...|||||.|.||:.|:.:..:|..|..|...|
plant  3447 -LDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTSAIRPQINAF 3510

  Fly   804 LEGFNEVVPLEWLKYFDERELELILCGMQDVDVEDWQRNTIYRHYNRNSKQVVWFWQFVRETDNE 868
            |||.||::|.|.:..|:::||||::.|:.::|.:|.:.||.|..|...|..:.|||:.|:....|
plant  3511 LEGLNELIPRELVSIFNDKELELLISGLPEIDFDDLKANTEYTSYTVGSPVIRWFWEVVKAFSKE 3575

  Fly   869 KRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCIEKV-GKETWLPRSHTCFNRLDLPPYKSYDQL 932
            ..||.|||||||.:||:.||..|.|.:||||..|.|. |....||.:|||||:||||.|:|.:|:
plant  3576 DMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYGSPERLPSAHTCFNQLDLPEYQSKEQV 3640

  Fly   933 VEKLTFAIEE-TEGF 946
            .|:|..||.| .|||
plant  3641 QERLLLAIHEANEGF 3655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_476753.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736
HUL4 <395..946 CDD:227354 161/403 (40%)
UPL2NP_177189.1 DUF908 88..357 CDD:428721
DUF913 417..765 CDD:461803
UBA_atUPL1_2_like 1275..1312 CDD:270512
UBM 2587..2615 CDD:464159
UBM 2625..2656 CDD:464159
HECTc 3296..3656 CDD:238033 156/363 (43%)
Blue background indicates that the domain is not in the aligned region.

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