DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and UPL1

DIOPT Version :10

Sequence 1:NP_476753.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001185245.1 Gene:UPL1 / 842036 AraportID:AT1G55860 Length:3681 Species:Arabidopsis thaliana


Alignment Length:363 Identity:158/363 - (43%)
Similarity:227/363 - (62%) Gaps:13/363 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   594 IKITVTRQTLFEDSYHQI-MRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEVLNPMYCL 657
            ::|:|.|..:.||||:|: ||.| .:|:.||.:.|:||||:|.||::|||:.|||..:.:....|
plant  3319 LRISVRRAYVLEDSYNQLRMRSP-QDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALL 3382

  Fly   658 FEYANKNNYSLQINPASYVNPDHLQYFKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTIKD 722
            |.... |:.:.|.||.|....:||.||||:||.:|.||:.|:.:...||..|||.:|..|:|..|
plant  3383 FTTVG-NDATFQPNPNSVYQTEHLSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHD 3446

  Fly   723 IETIDPEFYNSLIWVKDNNIDECGLELWFSVDFEVLGQIIH-------HELKENGEKERVTEENK 780
            ||.:||::|.:|.|:.:|::.:. |:|.||:|.:....|::       :|||..|...|||||.|
plant  3447 IEAVDPDYYKNLKWLLENDVSDI-LDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETK 3510

  Fly   781 EEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDERELELILCGMQDVDVEDWQRNTIY 845
            .||:.|:....:|..|..|...|||||||::|.|.:..|:::||||::.|:.::|.:|.:.||.|
plant  3511 HEYVDLVAGHILTNAIRPQINAFLEGFNELIPRELVSIFNDKELELLISGLPEIDFDDLKANTEY 3575

  Fly   846 RHYNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCIEKV-GKET 909
            ..|...|..:.|||:.|:....|..||.|||||||.:||:.||..|.|.:||||..|.|. |...
plant  3576 TSYTAGSPVIHWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYGAPE 3640

  Fly   910 WLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEE-TEGF 946
            .||.:|||||:||||.|:|.:||.|:|..||.| :|||
plant  3641 RLPSAHTCFNQLDLPEYQSKEQLQERLLLAIHEASEGF 3678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_476753.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736
HUL4 <395..946 CDD:227354 156/361 (43%)
UPL1NP_001185245.1 DUF908 88..357 CDD:428721
DUF913 418..763 CDD:461803
UBA_atUPL1_2_like 1273..1310 CDD:270512
UBM 2603..2631 CDD:464159
UBM 2641..2672 CDD:464159
HECTc 3319..3679 CDD:238033 158/363 (44%)
Blue background indicates that the domain is not in the aligned region.

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