DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and hace1

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:XP_012818577.2 Gene:hace1 / 734146 XenbaseID:XB-GENE-5757512 Length:1012 Species:Xenopus tropicalis


Alignment Length:1020 Identity:273/1020 - (26%)
Similarity:404/1020 - (39%) Gaps:254/1020 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 SKSKRKTDLVKNSYLPKWNEEFTVLITP-------NSTLHFKVLDHSSFRKDAMLGERIINLAHI 135
            ::|.|:...|:   ||:.||.....:.|       .|.|  ::|.:|.|..:...|....:|.||
 Frog    80 TRSLRRARTVE---LPEDNETAVYTLMPMVMADQHRSVL--ELLSNSKFDVNYAFGRVKRSLLHI 139

  Fly   136 LQHYNGRCEFLELTIDLFVTSKSDNRQTKSGEL---VAILNGLKLDMSKLQIQPVAGQQNGNPPV 197
            .    ..|..:|..:.|.......|.|..||..   :|..||.|..||||...........|..:
 Frog   140 A----ANCGSVECLVLLLKRGADPNYQDISGCTPLHLAARNGQKKCMSKLLEYNADVNICNNEGL 200

  Fly   198 QAVNPSVVSDAAAGRSCMIYGGVR--ARMRLRSSSGNS-------NGGETR-SPLPNGGGDHRRS 252
            .|::...|:    ||:.:::..|:  ..:.:..:.|.:       ||.:|. ..|.:.|.|..|.
 Frog   201 TAIHWLAVN----GRTELLHDLVQHVTNVDVEDAMGQTALHVACQNGHKTTVLCLLDSGADINRP 261

  Fly   253 TQAPPVWEQQQQQSQNQQQPLRMVNGSGAAVPQTAPYPQQPPAPALARPLTQVYGALPENTQP-- 315
                                    |.|||                     |.:|.|.....:.  
 Frog   262 ------------------------NVSGA---------------------TPLYFACSHGQRDTA 281

  Fly   316 ------AAVYLPAGGGAAVGPPGVAGPPIE---QPGVGLPVSQSTDPQLQTQP---------ADD 362
                  .|.|||...|..         |::   |.|.|    ::.|..:|..|         ..:
 Frog   282 QILLLRGAKYLPDKNGVT---------PLDLCVQGGYG----ETCDILIQHHPRLFQTLIQMTQN 333

  Fly   363 EPLPAGWEIR-----LDQYGRRYYVDHNT-----RSTYWEKPTPLPPGWEIRKDGRGRVYYVDHN 417
            |.|... .:|     |.|.....|:...|     .:|...|...:...:|.:.....|:..:..:
 Frog   334 EDLREN-TLRQVLEHLSQQSEVQYLKILTGLAEVATTNGHKLLSISSSYEAQMKSLLRIVRIFCH 397

  Fly   418 TRKTTWQRPNSERLMHFQHWQGQRAHVVSQGNQ----RYLYSQQQQQPT-AVTAQVT--QDDEDA 475
            ..:.....||:...|.:...:..|..|....|.    |.:..::...|. .:..|.|  ||..:.
 Frog   398 VFRIGPSSPNNGNDMGYNGNKTPRNQVFKVRNVYDVFRKINIKEMNLPNHTLIYQATSEQDPLEL 462

  Fly   476 LGPLPDGW---------EKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEVSLINEGPLPPGWEIRY 531
            |....|.|         :.|..|.|....:..:|:..|        |::||.::           
 Frog   463 LWHSLDEWLVLIATELTKNKRDSSNIACILLKQNQLDQ--------QDISLAHQ----------- 508

  Fly   532 TAAGERFFVDH---NTRRTTFED------PRPGA----------------------------PKG 559
            :|.||....||   :||...||.      ..|.|                            |:|
 Frog   509 SAIGESGSYDHLSSSTRAEDFESCSAAGKQEPVADGQDVISMTANRLSAVIQAFYMCCSCQMPQG 573

  Fly   560 AKGVYGVPRAYE--------------RSFRWKLSQFRYLCQSNALPS---HI------------- 594
            ...    ||..|              |:.:.....|.:|.:...|.|   ||             
 Frog   574 MTS----PRFIEFVCKHDDVLKCFVTRNPKIIFDHFHFLLECPELMSRFMHIIKAQPFKERCEWF 634

  Fly   595 ----------------------KITVTRQTLFEDSYHQIMRLPAYELRRRLYIIFRGEEGLDYGG 637
                                  .:.|.|.::|..|...:.:....:|::.:.:.|.||||:.. |
 Frog   635 YEHLLAGQPDSDMVHRPVNENDILLVHRDSIFRSSCEVVFKSNCEKLKQGIAVRFHGEEGMGQ-G 698

  Fly   638 VSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLQYFKFIGRFIAMALYHGRFIY 702
            |.||||.:||.|::||.|.||. .:.:..:.|.|..|.||||||.||:|.|..:.:||||.:.:.
 Frog   699 VVREWFDILSSEIINPDYALFT-QSADGTTFQPNSNSSVNPDHLNYFRFAGEILGLALYHRQLVN 762

  Fly   703 SGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFSVDFEVLGQIIHHELK 767
            ..||..|||.:|...:..:|:.:||||:..:|.|:.||:|.:.||||.|||:.:|.|.:....||
 Frog   763 IYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETDVFGAMEEVPLK 827

  Fly   768 ENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDERELELILCGMQ 832
            ..|....||:|||.||:.|:||.||||.|:.|...||:||:..:|...::.|||.||||:|.||.
 Frog   828 PGGASILVTQENKAEYVQLVTELRMTRAIQPQINGFLQGFHMFIPPSLIQLFDEYELELLLSGMP 892

  Fly   833 DVDVEDWQRNTIYRH-YNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNG 896
            ::||.||.:||.|.. |.|:.:.:.|||:.|:|...|:|..|||||||:.|||.||||.:||.:|
 Frog   893 EIDVNDWMKNTEYTSGYERDDQVIQWFWEVVQELTQEERVLLLQFVTGSSRVPHGGFAYIMGGSG 957

  Fly   897 PQRFCIEKVG-KETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAI 940
            .|.|.|..|. ....||.|.||.|.|.||.|.|.:.|.::|..|:
 Frog   958 LQNFTIAAVAYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVAL 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988 25/104 (24%)
WW 364..396 CDD:197736 8/41 (20%)
WW 397..426 CDD:278809 2/28 (7%)
WW 478..509 CDD:197736 7/39 (18%)
WW 522..554 CDD:197736 9/40 (23%)
HECTc 594..946 CDD:238033 152/384 (40%)
HECTc 620..946 CDD:214523 146/323 (45%)
hace1XP_012818577.2 PLN03192 <19..289 CDD:215625 53/266 (20%)
ANK repeat 134..163 CDD:293786 7/32 (22%)
ANKYR <160..288 CDD:223738 33/176 (19%)
ANK repeat 165..196 CDD:293786 10/30 (33%)
ANK repeat 198..229 CDD:293786 5/34 (15%)
ANK repeat 231..262 CDD:293786 8/54 (15%)
ANK repeat 264..289 CDD:293786 6/45 (13%)
HECTc 657..1006 CDD:238033 151/348 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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