DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and nedd4a

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001029358.1 Gene:nedd4a / 619412 ZFINID:ZDB-GENE-051005-2 Length:910 Species:Danio rerio


Alignment Length:757 Identity:287/757 - (37%)
Similarity:383/757 - (50%) Gaps:182/757 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 PADD-EPLPAGWEIRLDQYGRRYYVDHNTRSTYWEKPTP-LPPGWEIRKDGRGRVYYVDHNTRKT 421
            ||:. |.|..|||         :...|...|.:.....| ||||||.|:|..||.|||:|.:|.|
Zfish   163 PAEQGENLDPGWE---------FLEPHELCSPHHPHQLPALPPGWEERQDNLGRTYYVNHESRTT 218

  Fly   422 TWQRP--------NSERLMHFQHWQGQRAHV----VSQGNQRY------------------LYSQ 456
            .|.||        |.:|  ...|.:.|||.:    :|:..:.:                  |||.
Zfish   219 QWHRPTIQDSQRDNEQR--QETHSESQRAFLTRRQISEHEENHERRESPESWEIITADESTLYSS 281

  Fly   457 -QQQQP--------------------------TAVTAQVTQDDEDALGP---------------- 478
             .::.|                          |::|.|||...|:...|                
Zfish   282 LSERSPPPPHSPMEISTFCEEFNRLQATNDRRTSLTPQVTAAAEEVDRPSRWRSILFTHSLLPTS 346

  Fly   479 --LPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQ--------------GQEVSLI--------- 518
              ||.|||:|..|..|:|||||.:|||.|..|..|              ....||.         
Zfish   347 AGLPPGWEEKQDSKGRIYFVNHNSRTTTWTRPLIQLIQPPSESPASPMASGSTSLSQNAAGYALP 411

  Fly   519 ------------------NEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPR------------ 553
                              :.|.:|.|||:|...:|..||:||||:.||::|||            
Zfish   412 PDVSPQHTHTHTHTHTPEHPGLMPTGWEVRSAPSGRPFFIDHNTKTTTWDDPRLKVPVQMRRRVS 476

  Fly   554 ----------PG------------------APKGAK-------GVYGVPRAYERSFRWKLSQFRY 583
                      ||                  .|...|       ...|....|.|.::.|...||.
Zfish   477 LDPTDLGPLPPGWESECIVMAESSTLITTQKPHNGKTHDYRIQPSLGPAVPYSRDYKQKYEYFRK 541

  Fly   584 LCQSNA-LPSHIKITVTRQTLFEDSYHQIMRLPAYE-LRRRLYIIFRGEEGLDYGGVSREWFFLL 646
            ..:..| :|:..:::|.|..:.||||.:|:.:...| |:.||::.|.||:|||||||:||||||:
Zfish   542 KLKKPAEIPNRFELSVRRNAVLEDSYRRILSVKRSELLKARLWVEFEGEKGLDYGGVAREWFFLI 606

  Fly   647 SHEVLNPMYCLFEYANKNNYSLQINPAS-YVNPDHLQYFKFIGRFIAMALYHGRFIYSGFTMPFY 710
            |.|:.||.|.||||:..:||:|||||.| ..|.|||.|||||||...||:|||:.:.:.|..|||
Zfish   607 SKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFY 671

  Fly   711 KRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFSVDFEVLGQIIHHELKENGEKERV 775
            |.||.|.:|::|:|::|.|::|||.|:.:|  |...|:|.|::|.|:.||...||||..|....|
Zfish   672 KMMLQKPITLQDMESVDSEYFNSLRWILEN--DPTDLDLRFTIDEELFGQTHQHELKPGGADIVV 734

  Fly   776 TEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDERELELILCGMQDVDVEDWQ 840
            .:.||:|||.|:.:||....|::|...|.|||.|::|.:.:|.|||.||||::||:.||||.||:
Zfish   735 NDTNKKEYIHLVMQWRFVDRIQRQMTAFKEGFYELIPQDLIKIFDENELELLMCGLGDVDVNDWR 799

  Fly   841 RNTIYRH-YNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCIEK 904
            .||.|:: ||.|...::|||:.|...|.|||.|||||||||.|||:.|||||.||||||.|.||:
Zfish   800 ENTKYKNGYNPNHPAIIWFWKTVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQ 864

  Fly   905 VGKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEGF 946
            .|....|||:|||||||||||.:|:::|.|||..|||..:||
Zfish   865 WGTREKLPRAHTCFNRLDLPPXESFEELREKLHMAIENAQGF 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736 6/31 (19%)
WW 397..426 CDD:278809 17/28 (61%)
WW 478..509 CDD:197736 18/48 (38%)
WW 522..554 CDD:197736 17/53 (32%)
HECTc 594..946 CDD:238033 187/354 (53%)
HECTc 620..946 CDD:214523 178/327 (54%)
nedd4aNP_001029358.1 C2_NEDD4_NEDD4L 22..153 CDD:175999
WW 194..223 CDD:366073 17/28 (61%)
WW 349..378 CDD:366073 17/28 (61%)
WW 435..465 CDD:238122 16/29 (55%)
HECTc 577..906 CDD:214523 180/330 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100256
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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