DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and hecw1b

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:XP_021336549.1 Gene:hecw1b / 563730 ZFINID:ZDB-GENE-060503-2 Length:1555 Species:Danio rerio


Alignment Length:1386 Identity:353/1386 - (25%)
Similarity:505/1386 - (36%) Gaps:523/1386 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 NQGYHQL-SVTIEE---ASLRNNGFLKPNPYVELLI------------DSKSKRKTDLVKNSYLP 93
            :||..:| |.::.:   ..|:...|..|:||:::.|            ....::::.:|.|:..|
Zfish   206 SQGRRRLISFSLSDFQATGLKKGMFFNPDPYLKIAIHPGKHSIFPALPHHGQEKRSGIVCNTINP 270

  Fly    94 KW-NEEFTVLITPNSTLHFKVLDHSSFRKDA---------------------MLGERIIN--LAH 134
            .| .|.|..:..|...|..:|.|  .|.|..                     .:|:|:::  |..
Zfish   271 VWQRERFNFVSLPTDVLEIEVKD--KFAKSRPIIKRFLGKLSMPVQRLLEKHAIGDRVVSYTLGR 333

  Fly   135 IL--QHYNGRCEF--------------LELTIDLFVTSKSDNRQTKSGELVAILNG---LKLDMS 180
            .|  :|.:|:.:|              :.|:.:..|.:.....|.::.:.:::..|   |.||..
Zfish   334 RLPTEHVSGQLQFRFEITSSIHPDDEDMSLSTEQPVAAAEAQAQPQAEDTMSLDLGAPELPLDGD 398

  Fly   181 KLQIQ-PV---AGQQ----------------------------------NGNPPVQAVNP----- 202
            ...:: |:   :||.                                  |.....|.::|     
Zfish   399 TASVEMPMDVESGQSCAAEADVIEEECLEEEQQEGEAAAAAAAMEQSETNAEETTQVLDPINGAE 463

  Fly   203 -----------SVVSDAAAG------------------------------------RSCMI---- 216
                       ...|||.||                                    |.|.:    
Zfish   464 EEEAENNCAFAEESSDARAGEEDEAISDPQPASEEPDADLEEDCSLRIRTTPRRKPRPCSLPVSE 528

  Fly   217 ------------------YGGVRARMRLRS------SSGNSNGGETRSPL--------------- 242
                              |  :|....|.|      .:|:|.|.|...|:               
Zfish   529 LETVIASACGEPETPRSHY--IRIHHLLHSLPATQPQTGDSAGPEPDRPMGVEEEDEEEEEEGVT 591

  Fly   243 -------PNG---------------------GGD-----------HRRSTQAPPVWEQQQQQSQN 268
                   |||                     .||           ::||....|| ......|..
Zfish   592 LEDHALTPNGPRRTLPRSRSHERLSDLIQMLDGDGHPLGAEGQTGNQRSPDLSPV-ACCSHMSPR 655

  Fly   269 QQQPLRMVNGSGAAVPQTAPYPQQPPAPALARPLTQVYGALPENTQPAAVYLPAGGG-------- 325
            ...|:|..:...|...::..:..|.....:.:| ..:.|:..|..|.|....|..|.        
Zfish   656 ASGPIRAQSLDSARRSESTVFSSQDDEDEMEQP-NGILGSETETEQGAQCREPGDGSCQWEEAPD 719

  Fly   326 -------AAVGPPGVAGP--------PIEQPGVG-LPVSQSTDPQLQTQPADDEPLPAGWEIRLD 374
                   ..||...||||        |...|.|. ||..:   |.....|..|||||..||.|:|
Zfish   720 SHVQSPHGIVGNGEVAGPSGRRECPLPCNHPAVSQLPALR---PDPHHYPTIDEPLPPNWEARID 781

  Fly   375 QYGRRYYVDHNTRSTYWEKPT-------------------------------------------- 395
            .:||.:||||..|:|.|::||                                            
Zfish   782 SHGRVFYVDHINRTTTWQRPTSAATPDGLRRSGSVQQMEQLNRRYQTIQRTMATERREEESGSPR 846

  Fly   396 ----------------------------------------------------------------- 395
                                                                             
Zfish   847 NDRTANTETDSPLQTNELRRDTSCSPGHCQKITLLLQSPAVKFITHPEFFTVLHANYGAYRMFTN 911

  Fly   396 ---------------------------------------PLPPGWEIRKDGRGRVYYVDHNTRKT 421
                                                   .||.||||:.|.:|:.::||||:|.|
Zfish   912 SSCLKHMVLKIRRDARNFERYQHNRDLVTFLNRFADAQLELPRGWEIKTDPQGKSFFVDHNSRAT 976

  Fly   422 TWQRPN--------SERLMHFQHWQGQRAHVVSQGNQ----RYLYSQQQQQPTAVTAQVTQDDED 474
            |:..|.        ...|.|.||.|..|::...:.::    |.:....:...:.|.|...|..::
Zfish   977 TFIDPRIPLQNGRLPNHLTHRQHLQRLRSYSAGEASEVSRTRGVSLLARPGNSLVAAIRNQSQQE 1041

  Fly   475 ALGPLPDGWEKKIQSDNRVYFVNHKN--RTTQWEDP---------------RTQGQE-------- 514
               |:|..:..||     |.|:...|  ...|...|               ||:|.:        
Zfish  1042 ---PVPLAYNDKI-----VAFLRQPNIFEVLQERQPSFARNHSLKDKVHHIRTEGTQRLEKLSCD 1098

  Fly   515 ------VSLINEG-----PLP---PGWEIRYTAAGERFFVDHNTRRTTFEDPR--PG-APKGAKG 562
                  :||..|.     ||.   ||:..                     .||  || :|:.:.|
Zfish  1099 ADLVMLLSLFEEDIMSYVPLASFHPGFNF---------------------SPRCSPGSSPQNSPG 1142

  Fly   563 VY-----------------GVPRA-----YERSFRWKLSQFRYLCQSNAL---PSHIKITVTRQT 602
            ..                 |..||     |.|.|..||..|....::...   |..||:.|.|..
Zfish  1143 FLERTPLVPACCLSGESSPGTQRARAPAPYRRDFEAKLRNFYRKLEAKGYGQGPGKIKLIVRRDH 1207

  Fly   603 LFEDSYHQIMRLPAYELRR-RLYIIFRGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNY 666
            |.|.:::|:|.....||:| :|||.|.|||||||.|.|||:|||||.|:.||.|.||||:..:.|
Zfish  1208 LLEGTFNQVMAYSRKELQRNKLYITFVGEEGLDYSGPSREFFFLLSQELFNPYYGLFEYSANDTY 1272

  Fly   667 SLQINPASYVNPDHLQYFKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFY 731
            ::||:|.|....:||::|:|.||.:.:||.|...:.:.||.||||.:|.....:.|:|.:|.||:
Zfish  1273 TVQISPMSAFVENHLEWFRFSGRILGLALIHQYLLDAFFTRPFYKALLRLPTDLSDLEYLDEEFH 1337

  Fly   732 NSLIWVKDNNIDECGLELWFSVDFEVLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGI 796
            .||.|:|:|:|.:. |:|.|:|:.||.||:...|||..|...:|||:||:|||..|.:||:.||:
Zfish  1338 QSLQWMKENDITDV-LDLTFTVNEEVFGQVTERELKSGGTNVQVTEKNKKEYIERMVKWRVERGV 1401

  Fly   797 EQQTKTFLEGFNEVVPLEWLKYFDERELELILCGMQDVDVEDWQRNTIYR-HYNRNSKQVVWFWQ 860
            .|||:..:.||.|||....:..||.|||||::.|..::|:.||:.||.|| .|:.....:.|||.
Zfish  1402 VQQTQALVRGFYEVVDSRLVSVFDARELELVIAGTAEIDLNDWRNNTEYRGGYHDGHIVIRWFWG 1466

  Fly   861 FVRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCIEKVGKETWLPRSHTCFNRLDLPP 925
            .|...:||:|.|||||||||..||..||..|.||||.:||||||.||.|.|||:|||||||||||
Zfish  1467 AVERFNNEQRLRLLQFVTGTSSVPYEGFTALRGSNGLRRFCIEKWGKITSLPRAHTCFNRLDLPP 1531

  Fly   926 YKSYDQLVEKLTFAIEETEGF 946
            |.||..|.|||..|:|||..|
Zfish  1532 YPSYTMLYEKLLIAVEETSTF 1552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988 30/180 (17%)
WW 364..396 CDD:197736 18/179 (10%)
WW 397..426 CDD:278809 15/28 (54%)
WW 478..509 CDD:197736 9/47 (19%)
WW 522..554 CDD:197736 6/36 (17%)
HECTc 594..946 CDD:238033 179/353 (51%)
HECTc 620..946 CDD:214523 169/327 (52%)
hecw1bXP_021336549.1 HECW_N 73..192 CDD:318711
C2_NEDL1-like 213..349 CDD:176073 26/137 (19%)
WW 771..803 CDD:197736 17/31 (55%)
WW 952..983 CDD:197736 16/30 (53%)
HECTc 1223..1552 CDD:214523 171/329 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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