DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Su(dx) and smurf2

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001107898.1 Gene:smurf2 / 563633 ZFINID:ZDB-GENE-030131-1830 Length:765 Species:Danio rerio


Alignment Length:959 Identity:317/959 - (33%)
Similarity:450/959 - (46%) Gaps:248/959 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ANQGYH-------QLSVTIEEASLRNNGFLKPNPYVELLIDSKSK-RKTDLVKNSYLPKWNEEFT 100
            :|||..       :|:|...:..::.:.|..|:|:.::::|...: ..||.|:|:..||||:.:.
Zfish     2 SNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPKWNQHYD 66

  Fly   101 VLITPNSTLHFKVLDHSSFRKDAMLGERIINLAHILQHYNGRCEFLELTIDLFVTSKSDNRQTKS 165
            :.|..:.::...|.:|....|..  |...:....:|                   |.|.||...:
Zfish    67 LYIGKSDSITISVWNHKKIHKKQ--GAGFLGCVRLL-------------------SNSINRLKDT 110

  Fly   166 GELVAILNGLKLDMSKLQIQPVAGQQNGNPPVQAVNPSVVSDAAAGRSCMIYGGVRARMRLRSSS 230
            |.       .:||::||      |..:             ||...|:   |...:::|.|:    
Zfish   111 GY-------QRLDLNKL------GPND-------------SDTVRGQ---IVVSLQSRDRI---- 142

  Fly   231 GNSNGGETRSPLPNGGGDHRRSTQAPPVWEQQQQQSQNQQQPLRMVNGSGAAVPQTAPYPQQPPA 295
                                                           |||               
Zfish   143 -----------------------------------------------GSG--------------- 145

  Fly   296 PALARPLTQVYGALPENTQPAAVYLPAGGGAAVGPPGVAGPPIEQPGVGLPVSQSTDPQLQTQPA 360
                                                   ||.::                 ....
Zfish   146 ---------------------------------------GPVVD-----------------CSRL 154

  Fly   361 DDEPLPAGWEIRLDQYGRRYYVDHNTRSTYWEKPTPLPPGWEIRKDGRGRVYYVDHNTRKTTWQR 425
            .|..||.|||.|....||..|::|.||||.||:||  .|..|....||.....||.||...|   
Zfish   155 FDNDLPDGWEERRTASGRIQYLNHITRSTQWERPT--RPASEYSSPGRPLSCLVDENTPIMT--- 214

  Fly   426 PNSERLMHFQHWQGQRAHVVSQGNQRYLYSQQQQQPTAVTAQVTQDDEDALGPLPDGWEKKIQSD 490
            ||....:.....:.|...|.||.::.|:.......|.               .||:|:|::....
Zfish   215 PNGAAGVPADDPRVQERRVRSQRHRNYMSRTHLHTPP---------------DLPEGYEQRTTQQ 264

  Fly   491 NRVYFVNHKNRTTQWEDPRTQGQEVSLIN---EGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDP 552
            .:|||::.:...:.|.|||.. :::|.:|   .||||||||||.||.|..:|||||.|.|.|.||
Zfish   265 GQVYFLHTQTGVSTWHDPRVP-RDLSNVNCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDP 328

  Fly   553 RPGA---------PKGAKGV-------------------------------YGVPRAYERSFRWK 577
            |..|         |.|::..                               ..||: |:|....|
Zfish   329 RLSANLHLVLNPSPNGSRAAVEAQSSSRPGQLKEQAQSVVSPGNLPEDPECLTVPK-YKRDLVQK 392

  Fly   578 LSQFRY-LCQSNALPSHIKITVTRQTLFEDSYHQIMRLPAYELRRRLYIIFRGEEGLDYGGVSRE 641
            |...|. |.|......|.:|.|:|:.:||:||.|:|::...:|.:||.:.||||||||||||:||
Zfish   393 LKILRQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVARE 457

  Fly   642 WFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLQYFKFIGRFIAMALYHGRFIYSGFT 706
            |.:|||||:|||.|.||:|:..:.|:|||||.|.|||:||.||.|:||.:.||::||.:|..|||
Zfish   458 WLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFT 522

  Fly   707 MPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFSVDFEVLGQIIHHELKENGE 771
            :||||::|.|.:|:.|:|::||:.:|||:|:.||:|... |:..|.|:....|:||.||||.||:
Zfish   523 LPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDITGV-LDHTFCVEHNAYGEIIQHELKPNGK 586

  Fly   772 KERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDERELELILCGMQDVDV 836
            ...||::.|:||:.|...||..||||.|.....:|||||:|...||.|||:|||||:||:..:|:
Zfish   587 SIPVTQDTKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDI 651

  Fly   837 EDWQRNTIYRHYNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFC 901
            .||:.||..:|...:|..|.|||:.|...|.|:||||||||||:.|||:.||..|.|:.||:.|.
Zfish   652 NDWKSNTRLKHCTPDSNIVKWFWRAVESYDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFT 716

  Fly   902 IEKVGKET-WLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEGFCQE 949
            |.::...| .||::||||||:|:|||:|||:|.:||..|||||.||..|
Zfish   717 IHQIDASTNNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988 25/132 (19%)
WW 364..396 CDD:197736 17/31 (55%)
WW 397..426 CDD:278809 9/28 (32%)
WW 478..509 CDD:197736 9/30 (30%)
WW 522..554 CDD:197736 22/31 (71%)
HECTc 594..946 CDD:238033 184/352 (52%)
HECTc 620..946 CDD:214523 174/326 (53%)
smurf2NP_001107898.1 C2_Smurf-like 13..137 CDD:176028 34/173 (20%)
WW 159..188 CDD:278809 16/28 (57%)
WW 252..283 CDD:197736 9/30 (30%)
WW 298..330 CDD:197736 22/31 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 341..375 2/33 (6%)
HECTc 410..762 CDD:238033 184/352 (52%)
HECTc 437..762 CDD:214523 174/325 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167687at2759
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100256
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2273
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.