DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Su(dx) and PLEKHA5

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001243399.1 Gene:PLEKHA5 / 54477 HGNCID:30036 Length:1282 Species:Homo sapiens


Alignment Length:388 Identity:87/388 - (22%)
Similarity:141/388 - (36%) Gaps:96/388 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   479 LPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEV---SLINEGPLPPGWEIRYTAAGERFFV 540
            ||..|...|....||:|:|.:.::|.|..|.| |:.|   .......||.|||..||..|.|:::
Human    12 LPRSWTYGITRGGRVFFINEEAKSTTWLHPVT-GEAVVTGHRRQSTDLPTGWEEAYTFEGARYYI 75

  Fly   541 DHNTRRTTFEDPRPGAPKGAKGVYGVPRAYERSFRWKLSQFRYLCQSNALPSHIKIT-------- 597
            :||.|:.|.:.|..|.|.....::.|......:...:..:.|.:...|. .|:..:|        
Human    76 NHNERKVTCKHPVTGQPSQDNCIFVVNEQTVATMTSEEKKERPISMINE-ASNYNVTSDYAVHPM 139

  Fly   598 --VTRQTLFEDSYH-------QIMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEVLNP 653
              |.|.:......|       .|.|.|...:.||.::..:...|:...  .:.||      ||:.
Human   140 SPVGRTSRASKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLW--KKRWF------VLSD 196

  Fly   654 MYCLFEYANKNNY---------SLQINPASYVNPDHLQYFKFIGRFIAMALYHG--RFIY----S 703
            : |||.|.::...         |.||  |...:.||      |.|..|....|.  |..|    :
Human   197 L-CLFYYRDEKEEGILGSILLPSFQI--ALLTSEDH------INRKYAFKAAHPNMRTYYFCTDT 252

  Fly   704 GFTMPFY-KRMLN------------------KKLTIKDIET------------IDPEFYNSLIWV 737
            |..|..: |.||:                  .|:|.::..|            |.||..|:    
Human   253 GKEMELWMKAMLDAALVQTEPVKRITFNFRVDKITSENAPTKETNNIPNHRVLIKPEIQNN---- 313

  Fly   738 KDNNIDECGLELWFSVDFEVLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQT 800
             ..|.:...:|...:::.|..|      .:::|:...:|:.|..:..:|.:|:........||
Human   314 -QKNKEMSKIEEKKALEAEKYG------FQKDGQDRPLTKINSVKLNSLPSEYESGSACPAQT 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736
WW 397..426 CDD:278809
WW 478..509 CDD:197736 10/29 (34%)
WW 522..554 CDD:197736 14/31 (45%)
HECTc 594..946 CDD:238033 53/270 (20%)
HECTc 620..946 CDD:214523 46/227 (20%)
PLEKHA5NP_001243399.1 WW 12..41 CDD:278809 10/28 (36%)
WW 58..87 CDD:278809 13/28 (46%)
PH_PEPP1_2_3 164..267 CDD:270068 30/119 (25%)
PH 170..266 CDD:278594 28/112 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.