DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and HERC5

DIOPT Version :10

Sequence 1:NP_476753.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_057407.2 Gene:HERC5 / 51191 HGNCID:24368 Length:1024 Species:Homo sapiens


Alignment Length:385 Identity:104/385 - (27%)
Similarity:180/385 - (46%) Gaps:26/385 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   568 RAYERSF---RWKLSQFRYLCQSNALPSHIKITVTRQTLFEDSYHQIMRLPAYELRRRLYIIFRG 629
            :||.||.   ..:.|:|       ||.....:||.|..|.||..:|:.:....:||:.|::.|.|
Human   659 KAYLRSAAIEEERESEF-------ALRPTFDLTVRRNHLIEDVLNQLSQFENEDLRKELWVSFSG 716

  Fly   630 EEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNP--DHLQYFKFIGRFIA 692
            |.|.|.|||.:|:|:.|..|::.|.|.:|.|  ....|....|   |.|  :..:|| |.|....
Human   717 EIGYDLGGVKKEFFYCLFAEMIQPEYGMFMY--PEGASCMWFP---VKPKFEKKRYF-FFGVLCG 775

  Fly   693 MALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFSVDFEV 757
            ::|::.......|.:..:|::|::..:::|::.:.|:...:|..:.|:..|  ..|..|.:.|.|
Human   776 LSLFNCNVANLPFPLALFKKLLDQMPSLEDLKELSPDLGKNLQTLLDDEGD--NFEEVFYIHFNV 838

  Fly   758 LGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDER 822
            ........|..||....|.:.||.:|::....:.....::...:.|..||.::...:.:|.|...
Human   839 HWDRNDTNLIPNGSSITVNQTNKRDYVSKYINYIFNDSVKAVYEEFRRGFYKMCDEDIIKLFHPE 903

  Fly   823 ELELILCGMQDVDVEDWQRNTIYR-HYNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVG 886
            ||:.::.|..|.|.:.:::|..|. .||.:...:|.||:...:...|::.:.|.|:|||.|:.:.
Human   904 ELKDVIVGNTDYDWKTFEKNARYEPGYNSSHPTIVMFWKAFHKLTLEEKKKFLVFLTGTDRLQMK 968

  Fly   887 GFAELMGSNGPQRFCIEKVGKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEGF 946
            ..     :|....||..:...|....|:.|||:.|.||.|.:.:.:.|.|..||....||
Human   969 DL-----NNMKITFCCPESWNERDPIRALTCFSVLFLPKYSTMETVEEALQEAINNNRGF 1023

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_476753.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736
HUL4 <395..946 CDD:227354 102/383 (27%)
HERC5NP_057407.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
RCC1 1 96..155
ATS1 <140..346 CDD:444065
RCC1 2 156..208
RCC1 3 209..260
RCC1 4 262..312
RCC1 5 314..364
HECTc 681..1024 CDD:238033 96/356 (27%)
Blue background indicates that the domain is not in the aligned region.

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