DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and ASCC1

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001185728.1 Gene:ASCC1 / 51008 HGNCID:24268 Length:400 Species:Homo sapiens


Alignment Length:135 Identity:31/135 - (22%)
Similarity:51/135 - (37%) Gaps:38/135 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 IDSKSKRKTDLVKNSYLPKWNEE----------------FTVLITPNSTLHFKVLDHSSFRKDAM 124
            ||.::.||..:.:.:|..:.:||                :.|..||           ..||....
Human    11 IDGRNYRKNPVQEQTYQHEEDEEDFYQGSMECADEPCDAYEVEQTP-----------QGFRSTLR 64

  Fly   125 LGERIINLAHILQHYNGRCEFLELTIDL--FVTSKSDNRQTKSGELVAILNGLKLDM-SKLQIQ- 185
            ....:.||.|:  :.:..|.|.::|:|.  ..|.||.:...|.|:     ...|::| :|..|. 
Human    65 APSLLYNLIHL--NTSNDCGFQKITLDCQNIYTWKSRHIVGKRGD-----TRKKIEMETKTSISI 122

  Fly   186 PVAGQ 190
            |..||
Human   123 PKPGQ 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988 24/114 (21%)
WW 364..396 CDD:197736
WW 397..426 CDD:278809
WW 478..509 CDD:197736
WW 522..554 CDD:197736
HECTc 594..946 CDD:238033
HECTc 620..946 CDD:214523
ASCC1NP_001185728.1 Required for interaction with ASCC3. /evidence=ECO:0000269|PubMed:29997253 1..53 7/41 (17%)
vigilin_like_KH 99..148 CDD:239087 9/34 (26%)
PLN00108 157..370 CDD:177724
AKAP7_NLS 161..349 CDD:287446
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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