DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and Nedd4

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster


Alignment Length:1169 Identity:345/1169 - (29%)
Similarity:481/1169 - (41%) Gaps:392/1169 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ADGNGLPAGAASGGMEAGQTVNGAGSASPTP--TSSSGAGASGSANQ---GY------------- 48
            |..:||.|.||.....:..:|.|.....|.|  .::|.||...:..:   ||             
  Fly     3 ARSSGLVAAAALPVPSSSSSVAGGDVPRPPPRRRAASVAGQQQTRQEFGNGYTPRRSLAAVNDSG 67

  Fly    49 ---HQLSVTIEEASL-RNNGFLKPNPYV---------ELLIDS---KSKRKTDLVKNSYLPKWNE 97
               |...|.:...|| :.:.|...:|||         ::.|||   |:|:||      ..|.|||
  Fly    68 DSCHLRIVVLTGQSLAKKDIFGASDPYVRIDLNTINGDINIDSVLTKTKKKT------LNPTWNE 126

  Fly    98 EFTVLITPNS-TLHFKVLDHSSFRKDAMLGERIINLAHILQHYNGRCEFLELTIDLFVTSKSDNR 161
            ||...:.|:. .|.|:|.|.:...:|..||...:.|.::.....||      ||           
  Fly   127 EFIFRVKPSEHKLVFQVFDENRLTRDDFLGMVELTLVNLPTEQEGR------TI----------- 174

  Fly   162 QTKSGELVAILNGLKLDMSKLQIQPVAGQQNGNPPVQAVNPSVVSDAAAGRSCMIYGGVR----- 221
                                       |:|:     ..:.|.    .:.|....|.|.:|     
  Fly   175 ---------------------------GEQS-----YTLRPR----RSVGAKSRIKGTLRIYHAF 203

  Fly   222 ---ARMRLRSSSGNSNGGETRSPLPNGGGDHRRSTQAPPVWEQQQQQSQNQQQPLRMVNGSGAAV 283
               .|.:...|||||:|                      .||.              |..:.|..
  Fly   204 IRETREQSEPSSGNSDG----------------------EWEH--------------VEATNAGE 232

  Fly   284 PQTAPYPQQPPAPALARPLTQVYGALPENTQPAAVYLPAGGGAAVGPPGVAGPPIEQPGVGLPVS 348
            ....|:|                             .|.||                        
  Fly   233 TSAQPHP-----------------------------FPTGG------------------------ 244

  Fly   349 QSTDPQLQTQPADDEPLPAGWEIRLDQYGRRYYVDHNTRSTYWEKPTPL---------------- 397
                         .:.||||||.|.|..||.|||:|..|:|.|::||.|                
  Fly   245 -------------HDALPAGWEERQDANGRTYYVNHTARTTQWDRPTVLNSHSSQSTDDQLASDF 296

  Fly   398 ----------------------------------------------PPGWEIRKDG---RGRVYY 413
                                                          ||......:|   :..:.|
  Fly   297 QRRFHISVDDTESGRSADSISHNSIEDNNNAAGLAYTPKTAATSSAPPNTPTNNNGILAQIAMQY 361

  Fly   414 ---------VDHN---------------------------------------------TRKTT-- 422
                     |||.                                             ||:..  
  Fly   362 RAEEDQDPTVDHTSFVYNSLRHPVAHRQPEISATSLQNDLRPVREAPGVPDIAITNPFTRRAAGN 426

  Fly   423 ------WQRPNSERLMHF---QHWQGQRA-----------HVVSQGNQRYLYSQQQQQPT----- 462
                  ||:....:.|..   ||.|.|:.           |...:...|....|||.:|:     
  Fly   427 MAGGAGWQQERRRQQMQLHIQQHQQRQQQQQQNRILLDVDHRQQEPQHRGQRHQQQHRPSNEDTD 491

  Fly   463 ------------AVTAQVTQDDEDAL-----------GPLPDGWEKKIQSDNRVYFVNHKNRTTQ 504
                        ..|.:.:::|..|:           .|||..|..::..:.|.:|::|.:|.|.
  Fly   492 HTDSHNPSDISAPSTRRNSEEDNAAVPPMEQNTGGEEEPLPPRWSMQVAPNGRTFFIDHASRRTT 556

  Fly   505 WEDPRTQGQEVSLINE--------GPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRPGAPKGAK 561
            |.||| .|:...:.|:        ||||.|||.|....|..|::|||||.|.:||||...|    
  Fly   557 WIDPR-NGRASPMPNQTRRVEDDLGPLPEGWEERVHTDGRVFYIDHNTRTTQWEDPRLSNP---- 616

  Fly   562 GVYGVPRAYERSFRWKLSQFR-YLCQSNALPSHIKITVTRQTLFEDSYHQIMRLPAYE-LRRRLY 624
            .:.|....|.|.::.|...|: ::.:...:|:..:|.:.|.::.||||..|..:...: |:.:|:
  Fly   617 NIAGQAVPYSRDYKQKYEYFKSHIRKPTNVPNKFEIRIRRTSILEDSYRIISSVTKTDLLKTKLW 681

  Fly   625 IIFRGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPAS-YVNPDHLQYFKFIG 688
            :.|.||.||||||::||||:|||.|:.||.|.||||:..:||:||||..| ..|.:||.||||||
  Fly   682 VEFEGETGLDYGGLAREWFYLLSKEMFNPYYGLFEYSAMDNYTLQINNGSGLCNEEHLSYFKFIG 746

  Fly   689 RFIAMALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFSV 753
            |...||:|||:.:.:.|..||||.||.|.:.:||:|::|.|:||||:|:|:|  |...|||.|.:
  Fly   747 RIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEYYNSLMWIKEN--DPRILELTFCL 809

  Fly   754 DFEVLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKY 818
            |.:|.||...||||..|....||.|||:|||.|:.|||....:::|..:||:||..::||..:|.
  Fly   810 DEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVARVKEQMSSFLDGFGSIIPLNLIKI 874

  Fly   819 FDERELELILCGMQDVDVEDWQRNTIYR-HYNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCR 882
            |||.||||::||:|::||:||:.||:|: .|:.|...:.|||:.|....||.|:|||||||||.|
  Fly   875 FDEHELELLMCGIQNIDVKDWRENTLYKGDYHMNHIIIQWFWRAVLSFSNEMRSRLLQFVTGTSR 939

  Fly   883 VPVGGFAELMGSNGPQRFCIEKVGKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEGF 946
            ||:.||.||.||||||.|.|||.|.....||:||||||||||||:.|.||.:||..|||.::||
  Fly   940 VPMNGFKELYGSNGPQMFTIEKWGTPNNFPRAHTCFNRLDLPPYEGYLQLKDKLIKAIEGSQGF 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988 35/154 (23%)
WW 364..396 CDD:197736 18/31 (58%)
WW 397..426 CDD:278809 12/155 (8%)
WW 478..509 CDD:197736 11/30 (37%)
WW 522..554 CDD:197736 18/31 (58%)
HECTc 594..946 CDD:238033 184/354 (52%)
HECTc 620..946 CDD:214523 176/327 (54%)
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999 41/191 (21%)
WW 248..277 CDD:278809 17/28 (61%)
WW 531..560 CDD:278809 9/28 (32%)
WW 581..613 CDD:197736 18/31 (58%)
HECTc 650..1003 CDD:238033 184/354 (52%)
HECTc 674..1003 CDD:214523 177/330 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446997
Domainoid 1 1.000 50 1.000 Domainoid score I3372
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D13657at50557
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100256
Panther 1 1.100 - - P PTHR11254
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2273
SonicParanoid 00.000 Not matched by this tool.
98.780

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