DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and Ube3a

DIOPT Version :10

Sequence 1:NP_476753.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:XP_061511705.1 Gene:Ube3a / 3291570 VectorBaseID:AGAMI1_003809 Length:1059 Species:Anopheles gambiae


Alignment Length:400 Identity:129/400 - (32%)
Similarity:222/400 - (55%) Gaps:40/400 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   568 RAY-ER--SFRWKLSQFRYLCQSNALPS---HIKITVTRQTLFEDSYHQI----MRLPAYELRRR 622
            |.| ||  ||..:..|.|.  .|:||.:   ::.:.:.|..:.:|:..::    |..|. :|:::
Mosquito   676 RMYSERRLSFLQQQQQLRQ--NSSALQAVNPYLNLKIRRDHIIDDALVELEIIAMSNPK-DLKKQ 737

  Fly   623 LYIIFRGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLQYFKFI 687
            |.:.|.||:|:|.||||:|:|.|:..|:.||.|.:| ..|:::.::..|..|:.|.   ..|..|
Mosquito   738 LVVEFTGEQGIDEGGVSKEFFQLIIEEIFNPDYGMF-VTNEDSNTVWFNSISFENE---AQFTLI 798

  Fly   688 GRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKD---NNIDECGLEL 749
            |..:.:|:|:...:...|.|..|::::..|.:..|::.::|..:|||..:.|   |:::|..::.
Mosquito   799 GIVLGLAIYNNIILAVNFPMVVYRKLMGMKGSFLDLKDLNPVLFNSLKSLLDYTENDMEEVFMQT 863

  Fly   750 WFSVDF-EVLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVV-- 811
             |.:.: :|.|.::.||||.:|:|..||::||::::.|.:::.:.:.:|:|...|..||..|.  
Mosquito   864 -FKIGYRDVFGNLLEHELKPDGDKIFVTQDNKQDFVELYSDFMLNKSVEKQFNAFRRGFQMVTDE 927

  Fly   812 -PLEWLKYFDERELELILCGMQDVDVEDWQRNTIYR-HYNRNSKQVVWFWQFVRETDNEKRARLL 874
             ||..|  |...|:|||:||.::.|.::.:::|.|. .:...|:.:..||..|.....|.:.:||
Mosquito   928 SPLHLL--FRPEEVELIVCGSKEFDFDELEQSTEYEGGFTAESQTIKDFWSIVHGLSMEVKRKLL 990

  Fly   875 QFVTGTCRVPVGGFAEL---MGSNGPQRFCIEKVGKETWLPRSHTCFNRLDLPPYKSYDQLVEKL 936
            ||.||:.||||||.:.|   :..|||.         ...||.||||||.|.||.|.|.::|.|:|
Mosquito   991 QFTTGSDRVPVGGLSRLKLVVARNGPD---------SDRLPTSHTCFNVLLLPEYNSKEKLEERL 1046

  Fly   937 TFAIEETEGF 946
            ..||..::||
Mosquito  1047 LKAINYSKGF 1056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_476753.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736
HUL4 <395..946 CDD:227354 127/398 (32%)
Ube3aXP_061511705.1 None
Blue background indicates that the domain is not in the aligned region.

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