DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and Hectd2

DIOPT Version :10

Sequence 1:NP_476753.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:XP_038936565.1 Gene:Hectd2 / 309514 RGDID:1305536 Length:813 Species:Rattus norvegicus


Alignment Length:370 Identity:122/370 - (32%)
Similarity:191/370 - (51%) Gaps:30/370 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   594 IKITVTRQTLFEDSYHQIMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEVLNPMYCLF 658
            :.:.|.|..|..||..::.|..| :|:::|.:.|.||.|||.||:::|||.||..::.:|.|.:|
  Rat   454 LNMKVRRTHLVSDSLDELTRKRA-DLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMF 517

  Fly   659 EYANKNNYSLQINPASYVNPDHLQYFKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNK------- 716
            .| :|:::   .:..|....|:...|:.:|..:.:|:|:...:...|....||::|:.       
  Rat   518 TY-HKDSH---CHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPVVPSDQ 578

  Fly   717 -------KLTIKDIETIDPEFYNSL--IWVKDNNIDECGLELWFSVDFEVLGQIIHHELKENGEK 772
                   .:||.|:..|.||..:.|  :...:.|::| .....|.|..|..|.|..:.||..|:|
  Rat   579 STPVGICSVTIDDLCQIMPELAHGLKELLSYEGNVEE-DFYSTFQVFQEEFGVIKSYNLKPGGDK 642

  Fly   773 ERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDERELELILCGMQDVDVE 837
            ..||.:|:.||:.|.|::.:.:.|.:|...|..||:.|.....|......|:|:::||..::|:.
  Rat   643 IPVTNQNRREYVQLYTDFLLNKSIYKQFAAFYCGFHSVCASNALMLLRPEEVEILVCGSPELDMH 707

  Fly   838 DWQRNTIYRHYNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCI 902
            ..||:|.|..|.:....:.:||..|.....|.:.:||.|.||:.||||||.|:|       .|.|
  Rat   708 ALQRSTQYDGYAKTDLTIRYFWDVVLGFPLELQKKLLHFTTGSDRVPVGGMADL-------NFKI 765

  Fly   903 EKVGKET-WLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEGF 946
            .|....| |||.:|||||:|.||||||...|.:||...|..:|||
  Rat   766 SKNETSTNWLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGF 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_476753.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736
HUL4 <395..946 CDD:227354 120/368 (33%)
Hectd2XP_038936565.1 HECTc 454..811 CDD:238033 122/370 (33%)
Blue background indicates that the domain is not in the aligned region.

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