DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and Wwp2

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001099654.1 Gene:Wwp2 / 291999 RGDID:1310091 Length:870 Species:Rattus norvegicus


Alignment Length:950 Identity:506/950 - (53%)
Similarity:625/950 - (65%) Gaps:118/950 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SSSGAGASGSANQGYHQLSVTIEEASLRNNGFLKP--NPYVELLID---SKSKRKTDLVKNSYLP 93
            |||.||.:....:....|.|...:..:.|.   :|  |.|||:.:|   |::|:....:.:|.| 
  Rat     5 SSSRAGVALPFEKSQLTLRVVSAKPKVHNR---QPRINSYVEVAVDGLPSETKKTGKRIGSSEL- 65

  Fly    94 KWNEEFTVLITPNSTLHFKVLDHSSFRKDAMLGERIINLAHILQHYNGRCEFLELTIDLFVTSKS 158
            .|||...:.:|..|.|..||....:.|.: :||...:||:::|::..|:.|..:||::|...:|.
  Rat    66 LWNEVIVLNVTAQSHLDLKVWSCHTLRNE-LLGTASVNLSNVLKNNGGKMENTQLTLNLQTENKG 129

  Fly   159 DNRQTKSGELVAILNGLKLDMSKLQIQPVAGQQNGNPPVQAVNPSVVSDAAAGRSCMIYGGVRAR 223
            .  ....|||...|:|..:|:             |:.|    |.|.|:|.:...|          
  Rat   130 S--VVSGGELTIFLDGPTVDL-------------GSVP----NGSAVTDGSQPPS---------- 165

  Fly   224 MRLRSSSGNSNGGETRSPLPN----GGGD--HRRS----TQAPPVWEQQQQQSQNQQQPLR---- 274
               |.|||.:...|||...|:    ||..  ||.|    ..|....||........:||::    
  Rat   166 ---RESSGTALAPETRHQPPSTNCFGGRSRTHRHSGGSARTATATGEQSPGARNRHRQPVKNPSS 227

  Fly   275 --MVNGSGAAVPQTAPYPQQ--------PPAPALARPLTQVYGALPENTQPAAVYLPAGGGAAVG 329
              :.||:.:..|.||..|::        |||.|.:           .:..|....|||....|.|
  Rat   228 SGLANGTVSEEPTTASDPEELSVVGVTSPPAAASS-----------VSPNPNTTSLPAPSTPAEG 281

  Fly   330 PPGVAGPPIEQPGVGLPVSQSTDPQLQTQPADDEPLPAGWEIRLDQYGRRYYVDHNTRSTYWEKP 394
                     |:|      |.|...||.......:.||||||.|....||.|||||||::|.||: 
  Rat   282 ---------EEP------STSGTQQLPAAAQAPDALPAGWEQRQLPNGRVYYVDHNTKTTTWER- 330

  Fly   395 TPLPPGWEIRKDGRGRVYYVDHNTRKTTWQRPNSERLMHFQHWQGQRAHVVSQG-----NQRYLY 454
             |||||||.|.|.|||.||||||||.||||||.:|.:.:::.||.||..:  ||     :||:||
  Rat   331 -PLPPGWEKRTDPRGRFYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQL--QGAMQHFSQRFLY 392

  Fly   455 SQQQQQPTAVTAQVTQDDEDALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEVSLIN 519
                |..:|.|      |.|.|||||.||||: |.:.|||:|||..||||||||||||    :|.
  Rat   393 ----QSSSAST------DHDPLGPLPPGWEKR-QDNGRVYYVNHNTRTTQWEDPRTQG----MIQ 442

  Fly   520 EGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRPGAPKGAKGVYGVPRAYERSFRWKLSQFRYL 584
            |..||||||::||:.|.|:|||||||.|||:|||||...|.|  .|.|.|||||||||..|||:|
  Rat   443 EPALPPGWEMKYTSEGVRYFVDHNTRTTTFKDPRPGFESGTK--QGSPGAYERSFRWKYHQFRFL 505

  Fly   585 CQSNALPSHIKITVTRQTLFEDSYHQIMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHE 649
            |.|||||||:||:|:||||||||:.|||.:..|:||||||||.||||||||||::||||||||||
  Rat   506 CHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHE 570

  Fly   650 VLNPMYCLFEYANKNNYSLQINPASYVNPDHLQYFKFIGRFIAMALYHGRFIYSGFTMPFYKRML 714
            ||||||||||||.||||.|||||||.:|||||.||:|||||||||||||:||.:|||:|||||||
  Rat   571 VLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRML 635

  Fly   715 NKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFSVDFEVLGQIIHHELKENGEKERVTEEN 779
            ||:.|::|:|:||||||||:||:|:||:|||||||:|..|.|:||::..|||||.||..||||||
  Rat   636 NKRPTLRDLESIDPEFYNSIIWIKENNLDECGLELFFIQDMEILGKVTTHELKEGGENIRVTEEN 700

  Fly   780 KEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDERELELILCGMQDVDVEDWQRNTI 844
            |||||.|:|:||.|||:|:|||.||:|||||.|||||:||||:||||:|||||::|:.|||:|.|
  Rat   701 KEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVAPLEWLRYFDEKELELMLCGMQEIDMSDWQKNAI 765

  Fly   845 YRHYNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCIEKVGKET 909
            ||||.::|||:.||||.|:|.|||||.|||||||||||:||||||||:||||||:|||::|||||
  Rat   766 YRHYTKSSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDRVGKET 830

  Fly   910 WLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEGFCQE 949
            ||||||||||||||||||||:||.|||.:||||||||.||
  Rat   831 WLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988 36/129 (28%)
WW 364..396 CDD:197736 19/31 (61%)
WW 397..426 CDD:278809 23/28 (82%)
WW 478..509 CDD:197736 21/30 (70%)
WW 522..554 CDD:197736 22/31 (71%)
HECTc 594..946 CDD:238033 270/351 (77%)
HECTc 620..946 CDD:214523 254/325 (78%)
Wwp2NP_001099654.1 C2_E3_ubiquitin_ligase 17..142 CDD:175988 36/131 (27%)
WW 302..331 CDD:278809 19/30 (63%)
WW 332..361 CDD:278809 23/28 (82%)
WW 407..435 CDD:278809 19/28 (68%)
WW 447..477 CDD:238122 21/29 (72%)
HECTc 516..868 CDD:238033 271/351 (77%)
HECTc 539..867 CDD:214523 255/327 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 529 1.000 Domainoid score I279
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 971 1.000 Inparanoid score I303
OMA 1 1.010 - - QHG52003
OrthoDB 1 1.010 - - D126241at33208
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 1 1.000 - - otm46091
orthoMCL 1 0.900 - - OOG6_100256
Panther 1 1.100 - - O PTHR11254
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X898
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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