DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and ptr1

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_594902.1 Gene:ptr1 / 2542537 PomBaseID:SPAC19D5.04 Length:3227 Species:Schizosaccharomyces pombe


Alignment Length:386 Identity:166/386 - (43%)
Similarity:244/386 - (63%) Gaps:9/386 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   567 PRAYERSFRWKLSQF-RYLCQSNALPSH--IKITVTRQTLFEDSYHQIMRLPAYELR-RRLYIIF 627
            |:..|  |..|.:.| |.|.:..|...:  :.|||.|..:|.|||..:....|.|:: .:|.|.|
pombe  2842 PKVLE--FENKRNYFNRQLHEEAAKEQYPPLNITVRRDHVFLDSYRALHFKDADEVKFSKLNIHF 2904

  Fly   628 RGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLQYFKFIGRFIA 692
            |.|||:|.|||:|||..:|:.::.||.|.||.....:..:...|..|.||||||.:|||.||.|.
pombe  2905 RDEEGVDAGGVTREWLQVLARQMFNPDYALFLPVTGDATTFHPNRDSSVNPDHLSFFKFTGRIIG 2969

  Fly   693 MALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFSVDFEV 757
            .|||.||.:...|:...||.||::.:::||||::||::|.||:|:.:|:|.:...| .|:|:.:|
pombe  2970 KALYDGRLLDCHFSRAVYKHMLHRSVSVKDIESLDPDYYKSLVWMLNNDITDIITE-EFAVEKDV 3033

  Fly   758 LGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDER 822
            .|:....:|..||....|||.||:.|:..|.::::...::.|.|:.|:||::::|...::.|:|:
pombe  3034 FGEKTVVDLIPNGRNIPVTELNKQNYVNRMVDYKLRESVKDQLKSLLDGFSDIIPSHLIQIFNEQ 3098

  Fly   823 ELELILCGMQDVDVEDWQRNTIYRHYNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVGG 887
            ||||::.|:.::|::||:.||.|..||.:|.||.|||:.||..|.|:||:||||.|||.:||:.|
pombe  3099 ELELLISGLPEIDIDDWKNNTEYHGYNVSSPQVQWFWRAVRSFDEEERAKLLQFATGTSKVPLNG 3163

  Fly   888 FAELMGSNGPQRFCIEK-VGKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEE-TEGF 946
            |.||.|.:|.|||.|.| .|....||:||||||:||||.|.:|:||...|..||.| :|||
pombe  3164 FKELEGMSGFQRFNIHKSYGSLNRLPQSHTCFNQLDLPEYDTYEQLRSMLLTAINEGSEGF 3224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736
WW 397..426 CDD:278809
WW 478..509 CDD:197736
WW 522..554 CDD:197736
HECTc 594..946 CDD:238033 156/354 (44%)
HECTc 620..946 CDD:214523 146/328 (45%)
ptr1NP_594902.1 DUF908 96..367 CDD:283630
DUF913 436..735 CDD:283642
HARE-HTH <1930..2018 CDD:294801
DUF4414 2267..2347 CDD:291075
HUL4 2314..3227 CDD:227354 166/386 (43%)
HECTc 2870..3225 CDD:238033 158/356 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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