DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and Ube3a

DIOPT Version :10

Sequence 1:NP_476753.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_035798.2 Gene:Ube3a / 22215 MGIID:105098 Length:870 Species:Mus musculus


Alignment Length:518 Identity:158/518 - (30%)
Similarity:251/518 - (48%) Gaps:81/518 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   470 QDDEDALGPLPDGWEKKIQ---SDNRVYFVNHKNRTTQWEDPRTQGQEVSL-------------- 517
            :|||:   |:|:..|..:|   .|.|      :|:    :.||....|..|              
Mouse   390 EDDEE---PIPESSELTLQELLGDER------RNK----KGPRVDPLETELGVKTLDCRKPLISF 441

  Fly   518 ---INEGPLPPGWEI--RYTAAGERFFVDHNTRRTTFEDPRP---GAPKGAKGVYGVPRAYERSF 574
               ||| ||....|:  .||     ||......:.:|. ..|   .|.....|:|     |:...
Mouse   442 EEFINE-PLNDVLEMDKDYT-----FFKVETENKFSFM-TCPFILNAVTKNLGLY-----YDNRI 494

  Fly   575 RW----KLSQFRYLCQSNALPSHIKITVTRQTLFEDSYHQI----MRLPAYELRRRLYIIFRGEE 631
            |.    :::....|.|...|..::::.|.|..:.:|:..::    |..|| :|:::||:.|.||:
Mouse   495 RMYSERRITVLYSLVQGQQLNPYLRLKVRRDHIIDDALVRLEMIAMENPA-DLKKQLYVEFEGEQ 558

  Fly   632 GLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLQYFKFIGRFIAMALY 696
            |:|.||||:|:|.|:..|:.||...:|.| ::.......||:|:.....   |..||..:.:|:|
Mouse   559 GVDEGGVSKEFFQLVVEEIFNPDIGMFTY-DEATKLFWFNPSSFETEGQ---FTLIGIVLGLAIY 619

  Fly   697 HGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFSVDFEV---- 757
            :...:...|.|..|::::.||.|.:|:....|..|.||   ||....|..:|....:.|::    
Mouse   620 NNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSL---KDLLEYEGSVEDDMMITFQISQTD 681

  Fly   758 -LGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKY-FD 820
             .|..:.::|||||:|..:|.||::|::.|.:::.:.:.:|:|.|.|..||:.|.....||| |.
Mouse   682 LFGNPMMYDLKENGDKIPITNENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFR 746

  Fly   821 ERELELILCGMQDVDVEDWQRNTIY-RHYNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVP 884
            ..|:||::||.:::|.:..:..|.| ..|.|.|..:..||:.|....:|::...|||.|||.|.|
Mouse   747 PEEIELLICGSRNLDFQALEETTEYDGGYTRESVVIREFWEIVHSFTDEQKRLFLQFTTGTDRAP 811

  Fly   885 VGGFAELMGSNGPQRFCIEKVGKET-WLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEGF 946
            |||..:|       :..|.|.|.:| .||.||||||.|.||.|.|.::|.|:|..||...:||
Mouse   812 VGGLGKL-------KMIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKGF 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_476753.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736
HUL4 <395..946 CDD:227354 156/516 (30%)
Ube3aNP_035798.2 AZUL 27..81 CDD:465173
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..223
HECTc 518..868 CDD:238033 124/365 (34%)
Blue background indicates that the domain is not in the aligned region.

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