DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and Wwc1

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_740749.1 Gene:Wwc1 / 211652 MGIID:2388637 Length:1104 Species:Mus musculus


Alignment Length:457 Identity:96/457 - (21%)
Similarity:159/457 - (34%) Gaps:113/457 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   478 PLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQE----VSLINEGPLPPGWEIRYTAAGERF 538
            |||:|||:....|.:||:::|:||||.|.|||.:..:    ...|:: .||.|||..|......:
Mouse     7 PLPEGWEEARDFDGKVYYIDHRNRTTSWIDPRDRYTKPLTFADCISD-ELPLGWEEAYDPQVGDY 70

  Fly   539 FVDHNTRRTTFEDPRPGAPKGAKGVYGVPRAYERSFRWKLSQFRYL-----CQSNALPSHIKITV 598
            |:||||:.|..||||                    .:|:..|...|     ....||.:..:|..
Mouse    71 FIDHNTKTTQIEDPR--------------------VQWRREQEHMLKDYLVVAQEALSAQKEIYQ 115

  Fly   599 TRQ---TLFEDSYHQIMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEY 660
            .:|   .|.:..|.|:..:..::|..::.::........|                :|.....|.
Mouse   116 VKQQRLELAQQEYQQLHAVWEHKLGSQVSLVSGSSSSSKY----------------DPEILKAEI 164

  Fly   661 ANKNNYSLQIN--PASYVNPDHLQYFKFIGRFIAMALYHGRF--IYSGFTMPFYKRMLNKKLTIK 721
            |...:   ::|  ....|:..|...||..| |..:.....|.  ...|:.:...:.:|.:...||
Mouse   165 ATAKS---RVNKLKREMVHLQHELQFKERG-FQTLKKIDERMSDAQGGYKLDEAQAVLRETKAIK 225

  Fly   722 DI----ETIDPEFYNSLIWVKDNNIDECG--LELW-------------------FSVDFEVLGQI 761
            ..    |....:...||..:||....:.|  .:||                   .|...::.|..
Mouse   226 KAITCGEKEKQDLIKSLAMLKDGFRTDRGSHSDLWSSSSSLESSSFPMPKQFLDVSSQTDISGSF 290

  Fly   762 IHHELKENGEKERVT---EENKEEYITLMTE--------WRMTRGIEQ-------QTKTFLEGFN 808
            ......:..||.|:.   ||.|.....|..:        |......|:       :.:..|:...
Mouse   291 STSSNNQLAEKVRLRLRYEEAKRRIANLKIQLAKLDSEAWPGVLDSERDRLILINEKEELLKEMR 355

  Fly   809 EVVPLEWLKYFDERELELILCGMQDVD-----VEDWQRNTIYRHYNRNSKQVVWFWQFVRETDNE 868
            .:.|.:|    .:.|:|.:....:.::     ..|.|...:......|||:.    |.|||.:..
Mouse   356 FISPRKW----TQGEVEQLEMARRRLEKDLQAARDTQSKALTERLKLNSKRN----QLVRELEEA 412

  Fly   869 KR 870
            .|
Mouse   413 TR 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736
WW 397..426 CDD:278809
WW 478..509 CDD:197736 16/30 (53%)
WW 522..554 CDD:197736 15/31 (48%)
HECTc 594..946 CDD:238033 56/332 (17%)
HECTc 620..946 CDD:214523 50/303 (17%)
Wwc1NP_740749.1 WW 9..39 CDD:238122 15/29 (52%)
WW 55..84 CDD:278809 13/28 (46%)
ALDH-SF 378..>420 CDD:299846 10/41 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 429..449
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 509..547
C2_Kibra 661..784 CDD:176062
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 822..949
Interaction with histone H3. /evidence=ECO:0000250 836..1104
Interaction with PRKCZ. /evidence=ECO:0000250 945..988
ADDV motif 1102..1104
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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