DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and oxi-1

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_499392.1 Gene:oxi-1 / 176515 WormBaseID:WBGene00003898 Length:1066 Species:Caenorhabditis elegans


Alignment Length:750 Identity:180/750 - (24%)
Similarity:282/750 - (37%) Gaps:187/750 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 RMVNGSGAAVPQTAPYPQQPPAPALARPLTQVY-GALPENT-------------------QPAAV 318
            |.:.||..:...::....:|| |.|...:.||| .||  ||                   :....
 Worm   424 RKLGGSTDSASSSSKSESEPP-PTLIAIVCQVYMTAL--NTMVHMKGEIISGLCRDDQLLKQLWT 485

  Fly   319 YLPAGGGAAVGPPG--VAGPPIEQPGVGLPVSQSTDPQLQTQPADDEPLPAGWEIRLDQYGRRYY 381
            ||...|..|.|..|  ......||.|   |||.|    ||:......|..|  .:||       :
 Worm   486 YLREWGEKAGGTSGSIFNSSNAEQWG---PVSAS----LQSLKRPSSPHTA--TLRL-------F 534

  Fly   382 VDHNT-------RSTYWEKPTPLPPGWEIRKDGRGRVYYVDHNTRKTTWQ------RPNSERLMH 433
            ||...       ....:||.||..     .|:......||:....::.|.      ..|:..|.|
 Worm   535 VDCAAAIISILDEEEIFEKETPFS-----NKELESICKYVNIFCFRSIWSGAVDETSANTTGLFH 594

  Fly   434 FQH-------WQGQRAHVVSQGNQRYLYSQQQQQPTAVTAQVTQDDEDALGPLPDGWEKK----- 486
            ..|       .:..|....:..::.:|.|  :.:|:::|.:               :|||     
 Worm   595 SMHSLLTVLYERDSRRSFAANDSKFWLIS--EVKPSSLTIE---------------YEKKSGKGV 642

  Fly   487 IQSDNRVYFVNHKNRTTQWEDPRTQGQEVSLINEGPLPPGWEIRYTAAGERFFVDHNTRRTTFED 551
            :......:.|..|:|...:   |.|.|:                          |.|...|:..|
 Worm   643 LMMRKMAHLVPIKDRMLLF---RRQVQD--------------------------DKNRVATSLND 678

  Fly   552 PRPGAPKGAKGVYGVPRAYERSFRWKLSQFRYLCQSNALPSHIKITVTRQTLFEDSYHQIMRLPA 616
            |:...                   |                   |||.|..:.||.::.:.:|..
 Worm   679 PQMQT-------------------W-------------------ITVQRNRIIEDGFNHLSKLTI 705

  Fly   617 YELRRRLYIIFRGEEGLDYGGVSREWFF-----LLSHEVLNPMYCLFEYANKNNYSLQINPASYV 676
            ..|:..:.:.|..|:|||..|:.::..|     |...:|.:|...||  :..:...|..:|.|.:
 Worm   706 PALKSTIRVKFVNEQGLDEAGIDQDGVFKEFLELTLKKVFDPQLNLF--STTSTGVLYPSPTSSL 768

  Fly   677 NPDHLQYFKFIGRFIAMALYHGRFIYSGFTMPFYKRML--NKKLTIKDIETIDPEFYNSLIWVKD 739
            :.|||..|.|:||.:..|:|.|..:...........:|  ::.....::..:|||.|.||.:||.
 Worm   769 HDDHLALFTFVGRMLGKAVYEGIVVDVQLAPVLLAAVLGSHRLCAFDELSQLDPELYRSLTFVKR 833

  Fly   740 NNIDECGLELWFSVDFEVLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFL 804
            ...:...|.|.||||.:.:|:|...:|..:|....||.|||.:|:..|...|:.|..::|.|.|:
 Worm   834 YEGEMADLSLTFSVDEDFMGKISTVDLVPSGRTISVTNENKIDYVHRMAHHRVFRRTQEQCKAFV 898

  Fly   805 EGFNEVVPLEWLKYFDERELELILCGM-QDVDVEDWQRNTIY-RHYNRNSKQVVWFWQFV-RETD 866
            .|...::...||..|...:|:.::.|: .|:|:.|.:||..| ..::.|.:.:.|.|..: .:..
 Worm   899 TGMQSILQPTWLSLFAPNDLQCLISGVNSDIDLADLKRNVQYFGGFHGNHRLIKWLWDILENKFT 963

  Fly   867 NEKRARLLQFVTGTCRVPVGGFAEL--------------------MGSNGPQRFCIEKVGKETWL 911
            :|:|...|:|||...|.||.||:.|                    :||.......:.|....|.|
 Worm   964 SEERKLFLKFVTSCSRPPVLGFSYLEPPFSIRCVEVSDDQDQGDTLGSVVRGFLALRKGTAATRL 1028

  Fly   912 PRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEGF 946
            |.:.||||.|.||.|.....|:|||.:||....||
 Worm  1029 PTASTCFNLLKLPNYNKKSLLLEKLRYAIHAGTGF 1063

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736 8/38 (21%)
WW 397..426 CDD:278809 4/34 (12%)
WW 478..509 CDD:197736 6/35 (17%)
WW 522..554 CDD:197736 5/31 (16%)
HECTc 594..946 CDD:238033 111/381 (29%)
HECTc 620..946 CDD:214523 103/355 (29%)
oxi-1NP_499392.1 HECTc 684..1064 CDD:238033 113/400 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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