DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and Y92H12A.2

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001293292.1 Gene:Y92H12A.2 / 171719 WormBaseID:WBGene00022358 Length:724 Species:Caenorhabditis elegans


Alignment Length:670 Identity:273/670 - (40%)
Similarity:361/670 - (53%) Gaps:128/670 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 GLPVSQSTDPQLQTQPADDEPLPAGWEIRLDQYGRRYYVDHNTRSTYWEKPTP-----------L 397
            ||..:|:.:|       ::..|.:|...:....|..:...|...|:....|:.           :
 Worm   112 GLITTQAPNP-------EEYALQSGTASKGKSIGSLFLSFHFMPSSSDNSPSDSTADLQQTSSGM 169

  Fly   398 PPGWEIRKDGRGRVYYVDHNTRKTTWQRPNSERLMHFQHWQGQRAHVVSQGN------------- 449
            |.|||.|:||.||..||:|..|.|.:..|.|                ||.||             
 Worm   170 PQGWEEREDGNGRTVYVNHALRTTQFTPPES----------------VSNGNVDAITEQSVIEET 218

  Fly   450 --QRYLY---SQQQQQP---TAVTAQVT-----------------QDDEDALGPLPDGWEKKIQS 489
              :|..|   ||...:|   |.|:.::|                 :::||.| .|||||:.::..
 Worm   219 RRRRDNYEHRSQVTDEPSDTTIVSNELTAIDDAMRANFERGGGHVEEEEDEL-RLPDGWDMQVAP 282

  Fly   490 DNRVYFVNHKNRTTQWEDPRT-QGQEVSLINE------GPLPPGWEIRYTAAGERFFVDHNTRRT 547
            :.|.:|::|:.:||.|.|||. ....|.|:..      |.||.|||.|..|.|..||:|||.|||
 Worm   283 NGRTFFIDHRTKTTTWTDPRPGAATRVPLLRGKTDDEIGALPAGWEQRVHADGRVFFIDHNRRRT 347

  Fly   548 TFEDPR--------PGAPKGAKGVYGVPRAYERSFRWKLSQFR-YLCQSNALPSHIKITVTRQTL 603
            .:||||        |..|            |.|.::.|:...| .|.:.|:......:.|.|.||
 Worm   348 QWEDPRFENENIAGPAVP------------YSRDYKRKVEYLRSRLPKPNSNSGKCDMVVHRDTL 400

  Fly   604 FEDSYHQIMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSL 668
            |||||..||....|:||.:|:|.|.||.|||||||:|||||||||::.||.|.||||:..:||:|
 Worm   401 FEDSYRHIMDKKDYDLRNKLWIEFFGETGLDYGGVTREWFFLLSHQIFNPYYGLFEYSATDNYTL 465

  Fly   669 QINPASYV-NPDHLQYFKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYN 732
            ||||.|.. ||:||.||.||||.|.||:|||:.:.:.|..||||.||.||:|:.|:|::|.|:||
 Worm   466 QINPHSEACNPEHLSYFHFIGRIIGMAIYHGKLLDAFFIRPFYKMMLGKKITLFDMESVDNEYYN 530

  Fly   733 SLIWVKDNNIDECGLELWFSVDFEVLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIE 797
            |||:||||  |...|||.||:|..:.|:..:.||..||....|||:||||||             
 Worm   531 SLIYVKDN--DPADLELTFSLDDSIFGETQNIELIPNGANVPVTEDNKEEYI------------- 580

  Fly   798 QQTKTFLEGFNEVVPLEWLKYFDERELELILCGMQDVDVEDWQRNTIYR-HYNRNSKQVVWFWQF 861
                      ..|||...|:.||..||||::||:|.:||:||:.||||: .|..:|:.|..||:.
 Worm   581 ----------EAVVPSNLLRLFDANELELLMCGLQKIDVKDWKANTIYKGGYGPSSQVVHNFWKC 635

  Fly   862 VRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCIEKVGKETWLPRSHTCFNRLDLPPY 926
            :...|||.|||:||||:||.|||:.||.||.||||.|:|.||:.|....|||:||||||||||||
 Worm   636 ILSFDNEMRARVLQFVSGTSRVPMNGFRELYGSNGLQKFTIERWGSADMLPRAHTCFNRLDLPPY 700

  Fly   927 KSYDQLVEKLTFAIEETEGF 946
            .::.:|..||..|||.:|.|
 Worm   701 TTFKELKSKLLTAIENSEIF 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736 6/31 (19%)
WW 397..426 CDD:278809 14/28 (50%)
WW 478..509 CDD:197736 12/30 (40%)
WW 522..554 CDD:197736 20/39 (51%)
HECTc 594..946 CDD:238033 186/353 (53%)
HECTc 620..946 CDD:214523 173/327 (53%)
Y92H12A.2NP_001293292.1 C2 20..147 CDD:301316 8/41 (20%)
WW 170..198 CDD:278809 14/27 (52%)
WW 272..301 CDD:278809 11/28 (39%)
WW 323..353 CDD:197736 18/29 (62%)
HECTc 393..721 CDD:238033 187/353 (53%)
HECTc 415..720 CDD:214523 174/329 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100256
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2273
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.740

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