DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and Herc4

DIOPT Version :10

Sequence 1:NP_476753.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:XP_061505038.1 Gene:Herc4 / 1270105 VectorBaseID:AGAMI1_002839 Length:1060 Species:Anopheles gambiae


Alignment Length:516 Identity:135/516 - (26%)
Similarity:236/516 - (45%) Gaps:93/516 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   480 PDGWEKKIQSDNR--------------VYFVNHKNRTTQWEDPRTQGQEV-SLINEGPLPPGWEI 529
            |.|.||..|.:.|              :|::||:.||.:....:....|: .||         :|
Mosquito   586 PAGAEKPHQQELRYDPHLAAMLDMLAVLYWINHQKRTQKLPYEQFHINEIDDLI---------DI 641

  Fly   530 RYTAAGERFFVDHNTRRTTFEDPRPGAPKGAKGV----YGVPRAYERSFRWKLSQFRYLCQ---- 586
            |     :.:|     |.||          .||||    ...|..:..|.:..|.|.....|    
Mosquito   642 R-----QDYF-----RWTT----------DAKGVTFSLCNYPFVFNASAKMLLLQTDQAMQMYQA 686

  Fly   587 ------------------SNALPSHIKITVTRQTLFEDSYHQIMRLPAYELRRRLYIIFRGEEGL 633
                              ::|...:|.:.|||:.:.:|:..::....|.:|::.:.|.|.|||..
Mosquito   687 MQSAATASWLSMLYSPAANSAACQYIVLNVTRENIVQDTIRELSHYAASDLKKPIKIKFCGEEAE 751

  Fly   634 DYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHL----QYFKFIGRFIAMA 694
            |.|||.:|:|.||..::|:|.|.:|:...::|       |.:...|:.    ..|..||....:|
Mosquito   752 DAGGVRKEFFMLLLRDILDPKYGMFKSFEESN-------AIWFTEDYFDSDDSMFALIGILCGLA 809

  Fly   695 LYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKD---NNIDECGLELWFSVDFE 756
            :|:...|...|.:..||::|.:::.:||::.:.|....|:..:.|   .:::|. .:|.|:...:
Mosquito   810 IYNFTIIALPFPLALYKKLLGEEVDMKDLQDLAPTVARSMQSILDYEGGDLEEV-FDLCFTTTRD 873

  Fly   757 VLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDE 821
            ..|:|....||.|||..|:|:.||:|::.|..::...:.:|:..:.|..||..|.....:|.|..
Mosquito   874 YFGEIQTIPLKPNGENIRLTQGNKQEFVNLYIDYVFNKAVEKSFRQFHAGFMRVCGGRVMKLFKA 938

  Fly   822 RELELILCGMQDVDVEDWQRNTIYRH-YNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPV 885
            .||..::.|.::.|....:.|..|:: |....:.:.|||:...|...|::.:.|.|:||..|:|:
Mosquito   939 HELMSVVVGNEEYDWNVLEENAEYKNGYTCGDQTIRWFWEVFHELPLEEKKKFLLFLTGCDRIPI 1003

  Fly   886 GGFAELMGSNGPQRFCIEKVGKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEGF 946
            .|...:       :..|:....:.:||.:|||||.||||.|::.::|..||..||::|:||
Mosquito  1004 MGMKAI-------KIFIQPTPDDKFLPVAHTCFNLLDLPQYQTKEKLKYKLLQAIQQTQGF 1057

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_476753.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736
HUL4 <395..946 CDD:227354 133/514 (26%)
Herc4XP_061505038.1 None
Blue background indicates that the domain is not in the aligned region.

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