DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Su(dx) and Plekha5

DIOPT Version :10

Sequence 1:NP_476753.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:XP_006506926.1 Gene:Plekha5 / 109135 MGIID:1923802 Length:1270 Species:Mus musculus


Alignment Length:377 Identity:86/377 - (22%)
Similarity:139/377 - (36%) Gaps:94/377 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   479 LPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEV---SLINEGPLPPGWEIRYTAAGERFFV 540
            ||..|...|....||:|:|.:.::|.|..|.| |:.|   .......||.|||..||..|.|:::
Mouse    13 LPRSWTYGITRGGRVFFINEEAKSTTWLHPVT-GEAVVTGHRRQSTDLPTGWEEAYTFEGARYYI 76

  Fly   541 DHNTRRTTFEDPRPGAPKGAKGVYGVPRAYERSFRWKLSQFRYLCQSNALPS---------HIKI 596
            :||.|:.|.:.|..|.|.....::.|......:...:..:.|.:...|...:         |...
Mouse    77 NHNERKVTCKHPVTGQPSQDNCIFVVNDQTVATMTSEDKKERPISMINEASNYNMASDYAVHPMS 141

  Fly   597 TVTRQTLFEDSYH-------QIMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEVLNPM 654
            .|.|.:......|       .|.|.|...:.||.::..:...|:...  .:.||      ||:.:
Mouse   142 PVGRTSRASKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLW--KKRWF------VLSDL 198

  Fly   655 YCLFEYANKNNY---------SLQINPASYVNPDHLQYFKFIGRFIAMALYHG--RFIY----SG 704
             |||.|.::...         |.||  |.....||      |.|..|....|.  |..|    :|
Mouse   199 -CLFYYRDEKEEGILGSILLPSFQI--AMLTAEDH------INRKYAFKAAHPNMRTYYFCTDTG 254

  Fly   705 FTMPFY-KRMLN---------KKLT----IKDIET-----------------IDPEFYNSLIWVK 738
            ..|..: |.||:         |::|    :..|.|                 |.||..|.   .|
Mouse   255 KEMELWMKAMLDAALVQTEPVKRITFNFRVDKITTDSASTKETNNIPNHRVLIRPEVQNH---QK 316

  Fly   739 DNNIDECGLELWFSVDFEVLGQIIHHELKENGEKERVTEENKEEYITLMTEW 790
            :..|.:  :|...:::.|..|      .:::|:...:|:.|..:..:|::|:
Mouse   317 NKEISK--IEEKRALEAERYG------FQKDGQDRPLTKINSVKLNSLLSEY 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_476753.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736
HUL4 <395..946 CDD:227354 86/377 (23%)
Plekha5XP_006506926.1 WW 13..42 CDD:459800 10/28 (36%)
WW 59..88 CDD:459800 13/28 (46%)
PH_PEPP1_2_3 165..268 CDD:270068 30/119 (25%)
COG4913 <738..>881 CDD:443941
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.